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fam199x family with sequence similarity 199, X-linked [ Danio rerio (zebrafish) ]

Gene ID: 445309, updated on 27-Mar-2024

Summary

Official Symbol
fam199xprovided by ZNC
Official Full Name
family with sequence similarity 199, X-linkedprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040808-24
See related
Ensembl:ENSDARG00000009982 AllianceGenome:ZFIN:ZDB-GENE-040808-24
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:101060
Summary
Orthologous to human FAM199X (family with sequence similarity 199, X-linked). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 14
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (10344005..10371638, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (10037991..10065624, complement)

Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene si:zfos-2326c3.2 Neighboring gene interleukin 1 receptor accessory protein-like 2 Neighboring gene uncharacterized LOC103912066 Neighboring gene COMM domain containing 5 Neighboring gene cysteinyl leukotriene receptor 1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001003766.2NP_001003766.1  protein FAM199X

    See identical proteins and their annotated locations for NP_001003766.1

    Status: PROVISIONAL

    Source sequence(s)
    BC079509
    UniProtKB/Swiss-Prot
    Q6AXJ7
    Related
    ENSDARP00000017054.3, ENSDART00000003879.5
    Conserved Domains (1) summary
    pfam15814
    Location:56374
    FAM199X; Protein family FAM199X

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007125.7 Reference GRCz11 Primary Assembly

    Range
    10344005..10371638 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)