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Frg2f1 FSHD region gene 2 family member 1 [ Mus musculus (house mouse) ]

Gene ID: 433752, updated on 8-Feb-2024

Summary

Official Symbol
Frg2f1provided by MGI
Official Full Name
FSHD region gene 2 family member 1provided by MGI
Primary source
MGI:MGI:3035485
See related
Ensembl:ENSMUSG00000087385 AllianceGenome:MGI:3035485
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Orthologous to several human genes including FRG2C (FSHD region gene 2 family member C). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E18 (RPKM 2.4), CNS E14 (RPKM 1.6) and 28 other tissues See more
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Genomic context

Location:
4 D2.1; 4 55.43 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (119387505..119395966, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (119530308..119538769, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene 12957 Neighboring gene U6 small nuclear RNA, pseudogene 2 Neighboring gene forkhead box J3 Neighboring gene STARR-seq mESC enhancer starr_11236 Neighboring gene guanylate cyclase activator 2a (guanylin)

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

Markers

Clone Names

  • MGC73851, MGC100084

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
FSHD region gene 2 family member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001004178.1NP_001004178.1  FSHD region gene 2 family member 1

    See identical proteins and their annotated locations for NP_001004178.1

    Status: PROVISIONAL

    Source sequence(s)
    BC076608
    Consensus CDS
    CCDS51291.1
    UniProtKB/TrEMBL
    Q6P3A2
    Related
    ENSMUSP00000078560.7, ENSMUST00000079611.13
    Conserved Domains (1) summary
    pfam15315
    Location:31190
    FRG2; Facioscapulohumeral muscular dystrophy candidate 2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    119387505..119395966 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)