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LOC4330020 probable 60S ribosomal protein L14 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4330020, updated on 21-Dec-2023

Summary

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Gene symbol
LOC4330020
Gene description
probable 60S ribosomal protein L14
Locus tag
OSNPB_020622300
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OsRPL14; OJ1234_B11.29
Expression
Ubiquitous expression in flower buds (RPKM 211.6), flowers (RPKM 148.9) and 6 other tissues See more
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Genomic context

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See LOC4330020 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (24777871..24779713, complement)

Chromosome 2 - NC_029257.1Genomic Context describing neighboring genes Neighboring gene casein kinase 1-like Neighboring gene phosphatidylinositol N-acetylglucosaminyltransferase subunit C Neighboring gene glycolipid transfer protein 1 Neighboring gene RNA-binding protein 42

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029257.1 Chromosome 2 Reference IRGSP-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable 60S ribosomal protein L14
Names
OSJNOa283G08.1
Os02g0622300
putative hydroxyproline-rich glycoprotein 1
ribosomal protein L14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029257.1 Reference IRGSP-1.0 Primary Assembly

    Range
    24777871..24779713 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015767389.2 → XP_015622875.1  probable 60S ribosomal protein L14

    UniProtKB/TrEMBL
    A2X7C9, B9F156, Q6K1Q6, Q6K9M9
    Conserved Domains (1) summary
    cl27476
    Location:3 → 126
    Ribosomal_L14e; Ribosomal protein L14
Nucleotide Protein
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