SLCO2A1 solute carrier organic anion transporter family member 2A1 [Gallus gallus (chicken)] - Gene

Summary

Symbol: SLCO2A1provided by CGNC
Full Name: solute carrier organic anion transporter family member 2A1provided by CGNC
Primary source: CGNC:4877
See related: Ensembl:ENSGALG00010024705
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 9

Exon count:: 16

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	9	NC_052540.1 (4204929..4246699)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	9	NC_052581.1 (4037607..4079269)

Chromosome 9 - NC_052540.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables prostaglandin transmembrane transporter activity	IEA Inferred from Electronic Annotation more info	PubMed
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed
enables sodium-independent organic anion transmembrane transporter activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in prostaglandin transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in sodium-independent organic anion transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in transmembrane transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: solute carrier organic anion transporter family member 2A1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001198927.2 → NP_001185856.1 solute carrier organic anion transporter family member 2A1

See identical proteins and their annotated locations for NP_001185856.1

Status: PROVISIONAL

Source sequence(s)

HQ380377

UniProtKB/TrEMBL

A0A8V1A1J6, E5L948

Related

ENSGALP00010037070.1, ENSGALT00010060311.1

Conserved Domains (3) summary

cd06174
Location:160 → 413

MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...

cd01330
Location:438 → 488

KAZAL_SLC21; The kazal-type serine protease inhibitor domain has been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The KAZAL_SLC21 domain is a ...

TIGR00805
Location:21 → 622

oat; sodium-independent organic anion transporter

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

4204929..4246699

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_040705554.2 → XP_040561488.1 solute carrier organic anion transporter family member 2A1 isoform X1

UniProtKB/TrEMBL

A0A8V1A1J6, A0A8V1A3L5

Related

ENSGALP00010037079.1, ENSGALT00010060320.1

Conserved Domains (1) summary

cd17461
Location:28 → 537

MFS_SLCO2A_OATP2A; Solute carrier organic anion transporter 2A subfamily of the Major Facilitator Superfamily of transporters
XM_046898410.1 → XP_046754366.1 solute carrier organic anion transporter family member 2A1 isoform X2

UniProtKB/TrEMBL

E5L948

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

4037607..4079269

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046923845.1 → XP_046779801.1 solute carrier organic anion transporter family member 2A1 isoform X1
XM_046923846.1 → XP_046779802.1 solute carrier organic anion transporter family member 2A1 isoform X2