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RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 [ Gallus gallus (chicken) ]

Gene ID: 424107, updated on 5-Mar-2024

Summary

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Official Symbol
RAPH1provided by CGNC
Official Full Name
Ras association (RalGDS/AF-6) and pleckstrin homology domains 1provided by CGNC
Primary source
CGNC:6585
See related
Ensembl:ENSGALG00010022033
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
LPD
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
17
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 7 NC_052538.1 (13124670..13210266)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 7 NC_052579.1 (13048644..13134434)

Chromosome 7 - NC_052538.1Genomic Context describing neighboring genes Neighboring gene CD28 molecule Neighboring gene uncharacterized LOC101750642 Neighboring gene abl interactor 2 Neighboring gene cytochrome P450 family 20 subfamily A member 1 Neighboring gene microRNA 1659

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-associated and pleckstrin homology domains-containing protein 1
Names
lamellipodin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052538.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    13124670..13210266
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040703676.2 → XP_040559610.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZLF0
    Conserved Domains (3) summary
    cd01259
    Location:421 → 543
    PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
    cd16136
    Location:296 → 385
    RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)
    pfam08580
    Location:1130 → 1274
    KAR9; Yeast cortical protein KAR9

  2. XM_040703673.2 → XP_040559607.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZLF0
    Conserved Domains (3) summary
    cd01259
    Location:421 → 543
    PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
    cd16136
    Location:296 → 385
    RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)
    pfam08580
    Location:1130 → 1274
    KAR9; Yeast cortical protein KAR9

  3. XM_040703677.2 → XP_040559611.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZLF5
    Conserved Domains (3) summary
    cd01259
    Location:396 → 518
    PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
    cd16136
    Location:271 → 360
    RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)
    pfam08580
    Location:1105 → 1249
    KAR9; Yeast cortical protein KAR9

  4. XM_046943854.1 → XP_046799810.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X4

  5. XM_046943852.1 → XP_046799808.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X1

  6. XM_040703674.2 → XP_040559608.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZLF0
    Related
    ENSGALP00010032267.1, ENSGALT00010053550.1
    Conserved Domains (3) summary
    cd01259
    Location:421 → 543
    PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
    cd16136
    Location:296 → 385
    RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)
    pfam08580
    Location:1130 → 1274
    KAR9; Yeast cortical protein KAR9

  7. XM_046943853.1 → XP_046799809.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZLF5
    Related
    ENSGALP00010032272.1, ENSGALT00010053558.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052579.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    13048644..13134434
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040675826.2 → XP_040531760.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZLF0
    Conserved Domains (3) summary
    cd01259
    Location:421 → 543
    PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
    cd16136
    Location:296 → 385
    RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)
    pfam08580
    Location:1130 → 1274
    KAR9; Yeast cortical protein KAR9

  2. XM_040675824.2 → XP_040531758.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZLF0
    Conserved Domains (3) summary
    cd01259
    Location:421 → 543
    PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
    cd16136
    Location:296 → 385
    RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)
    pfam08580
    Location:1130 → 1274
    KAR9; Yeast cortical protein KAR9

  3. XM_040675827.2 → XP_040531761.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZLF5
    Conserved Domains (3) summary
    cd01259
    Location:396 → 518
    PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
    cd16136
    Location:271 → 360
    RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)
    pfam08580
    Location:1105 → 1249
    KAR9; Yeast cortical protein KAR9

  4. XM_046921796.1 → XP_046777752.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X4

  5. XM_046921794.1 → XP_046777750.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X1

  6. XM_040675825.2 → XP_040531759.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZLF0
    Conserved Domains (3) summary
    cd01259
    Location:421 → 543
    PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
    cd16136
    Location:296 → 385
    RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)
    pfam08580
    Location:1130 → 1274
    KAR9; Yeast cortical protein KAR9

  7. XM_046921795.1 → XP_046777751.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZLF5
Nucleotide Protein Strain
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