U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ACSL5 acyl-CoA synthetase long-chain family member 5 [ Gallus gallus (chicken) ]

Gene ID: 423896, updated on 3-Apr-2024

Summary

Go to the top of the page Help
Symbol
ACSL5provided by CGNC
Full Name
acyl-CoA synthetase long-chain family member 5provided by CGNC
Primary source
CGNC:52076
See related
Ensembl:ENSGALG00010019785
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ACSL5 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
23
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 6 NC_052537.1 (27498662..27518499)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 6 NC_052578.1 (27389068..27408969)

Chromosome 6 - NC_052537.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124418092 Neighboring gene uncharacterized LOC121111208 Neighboring gene tectorin beta Neighboring gene uncharacterized LOC107053735 Neighboring gene zinc finger DHHC-type containing 6 Neighboring gene vesicle transport through interaction with t-SNAREs 1A

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
long-chain-fatty-acid--CoA ligase 5
NP_001026408.3
XP_040558377.1
XP_040558378.1
XP_040558379.1
XP_046776291.1
XP_046776292.1
XP_046776293.1
XP_046776294.1
XP_046798902.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031237.3 → NP_001026408.3  long-chain-fatty-acid--CoA ligase 5

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000232
    UniProtKB/TrEMBL
    A0A8V0ZC41
    Related
    ENSGALP00010028241.1, ENSGALT00010047765.1
    Conserved Domains (1) summary
    cd05927
    Location:101 → 679
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    27498662..27518499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040702445.2 → XP_040558379.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZC41, Q5ZIG7
    Conserved Domains (1) summary
    cd05927
    Location:101 → 679
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  2. XM_046942946.1 → XP_046798902.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZC41

  3. XM_040702444.2 → XP_040558378.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZC41, Q5ZIG7
    Related
    ENSGALP00010028252.1, ENSGALT00010047788.1
    Conserved Domains (1) summary
    cd05927
    Location:101 → 679
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  4. XM_040702443.2 → XP_040558377.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZC41, Q5ZIG7
    Related
    ENSGALP00010028262.1, ENSGALT00010047812.1
    Conserved Domains (1) summary
    cd05927
    Location:101 → 679
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052578.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    27389068..27408969
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046920337.1 → XP_046776293.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

  2. XM_046920338.1 → XP_046776294.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

  3. XM_046920336.1 → XP_046776292.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

  4. XM_046920335.1 → XP_046776291.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

RNA

  1. XR_006935015.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous