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AP4S1 adaptor related protein complex 4 sigma 1 subunit [ Gallus gallus (chicken) ]

Gene ID: 423309, updated on 5-Mar-2024

Summary

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Symbol
AP4S1provided by CGNC
Full Name
adaptor related protein complex 4 sigma 1 subunitprovided by CGNC
Primary source
CGNC:7548
See related
Ensembl:ENSGALG00010005535
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (33823269..33839759)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (33797463..33813939)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene sec1 family domain containing 1 Neighboring gene cochlin Neighboring gene striatin 3 Neighboring gene HECT domain E3 ubiquitin protein ligase 1 Neighboring gene uncharacterized LOC107053511 Neighboring gene HEAT repeat containing 5A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-4 complex subunit sigma-1
Names
adaptor related protein complex 4 subunit sigma 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    33823269..33839759
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046942486.1 → XP_046798442.1  AP-4 complex subunit sigma-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XPJ4

  2. XM_015287637.4 → XP_015143123.2  AP-4 complex subunit sigma-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XPJ4
    Related
    ENSGALP00010007803.1, ENSGALT00010013241.1
    Conserved Domains (1) summary
    cd14832
    Location:3 → 140
    AP4_sigma; AP-4 complex subunit sigma

  3. XM_015287638.4 → XP_015143124.2  AP-4 complex subunit sigma-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XPJ4
    Conserved Domains (1) summary
    cd14832
    Location:3 → 140
    AP4_sigma; AP-4 complex subunit sigma

  4. XM_040702179.2 → XP_040558113.1  AP-4 complex subunit sigma-1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XI28
    Related
    ENSGALP00010007806.1, ENSGALT00010013244.1
    Conserved Domains (1) summary
    cl38905
    Location:3 → 98
    longin-like; Longin-like domains

  5. XM_040702175.2 → XP_040558109.1  AP-4 complex subunit sigma-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XPJ4
    Conserved Domains (1) summary
    cd14832
    Location:3 → 140
    AP4_sigma; AP-4 complex subunit sigma

  6. XM_040702176.2 → XP_040558110.1  AP-4 complex subunit sigma-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XPJ4
    Conserved Domains (1) summary
    cd14832
    Location:3 → 140
    AP4_sigma; AP-4 complex subunit sigma

  7. XM_421226.8 → XP_421226.3  AP-4 complex subunit sigma-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XPJ4
    Conserved Domains (1) summary
    cd14832
    Location:3 → 140
    AP4_sigma; AP-4 complex subunit sigma

  8. XM_040702174.2 → XP_040558108.1  AP-4 complex subunit sigma-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XPJ4
    Conserved Domains (1) summary
    cd14832
    Location:3 → 140
    AP4_sigma; AP-4 complex subunit sigma

  9. XM_040702178.2 → XP_040558112.1  AP-4 complex subunit sigma-1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XI28
    Conserved Domains (1) summary
    cl38905
    Location:3 → 98
    longin-like; Longin-like domains

  10. XM_040702180.2 → XP_040558114.1  AP-4 complex subunit sigma-1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XI28
    Conserved Domains (1) summary
    cl38905
    Location:3 → 98
    longin-like; Longin-like domains

  11. XM_040702177.1 → XP_040558111.1  AP-4 complex subunit sigma-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XPJ4
    Conserved Domains (1) summary
    cd14832
    Location:3 → 140
    AP4_sigma; AP-4 complex subunit sigma

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    33797463..33813939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040674031.2 → XP_040529965.1  AP-4 complex subunit sigma-1 isoform X1

    Conserved Domains (1) summary
    cd14832
    Location:3 → 140
    AP4_sigma; AP-4 complex subunit sigma

  2. XM_040674025.2 → XP_040529959.1  AP-4 complex subunit sigma-1 isoform X1

    Conserved Domains (1) summary
    cd14832
    Location:3 → 140
    AP4_sigma; AP-4 complex subunit sigma

  3. XM_040674028.2 → XP_040529962.1  AP-4 complex subunit sigma-1 isoform X2

    Conserved Domains (1) summary
    cl38905
    Location:3 → 98
    longin-like; Longin-like domains

  4. XM_046919510.1 → XP_046775466.1  AP-4 complex subunit sigma-1 isoform X1

  5. XM_040674024.2 → XP_040529958.1  AP-4 complex subunit sigma-1 isoform X1

    Conserved Domains (1) summary
    cd14832
    Location:3 → 140
    AP4_sigma; AP-4 complex subunit sigma

  6. XM_040674030.2 → XP_040529964.1  AP-4 complex subunit sigma-1 isoform X1

    Conserved Domains (1) summary
    cd14832
    Location:3 → 140
    AP4_sigma; AP-4 complex subunit sigma

  7. XM_040674022.2 → XP_040529956.1  AP-4 complex subunit sigma-1 isoform X1

    Conserved Domains (1) summary
    cd14832
    Location:3 → 140
    AP4_sigma; AP-4 complex subunit sigma

  8. XM_040674027.2 → XP_040529961.1  AP-4 complex subunit sigma-1 isoform X2

    Conserved Domains (1) summary
    cl38905
    Location:3 → 98
    longin-like; Longin-like domains

  9. XM_040674029.2 → XP_040529963.1  AP-4 complex subunit sigma-1 isoform X2

    Conserved Domains (1) summary
    cl38905
    Location:3 → 98
    longin-like; Longin-like domains

  10. XM_040674026.1 → XP_040529960.1  AP-4 complex subunit sigma-1 isoform X1

    Conserved Domains (1) summary
    cd14832
    Location:3 → 140
    AP4_sigma; AP-4 complex subunit sigma
Nucleotide Protein Strain
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