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RBMXL1 RBMX like 1 [ Gallus gallus (chicken) ]

Gene ID: 422248, updated on 3-Apr-2024

Summary

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Official Symbol
RBMXL1provided by CGNC
Official Full Name
RBMX like 1provided by CGNC
Primary source
CGNC:51674
See related
Ensembl:ENSGALG00010015895
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
RBMX
Orthologs
human mouse all
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Genomic context

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See RBMXL1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (4362727..4381750, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (4398213..4417236, complement)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene CD40 ligand Neighboring gene Rac/Cdc42 guanine nucleotide exchange factor 6 Neighboring gene uncharacterized LOC121110712 Neighboring gene small nucleolar RNA SNORD61 Neighboring gene atherin-like Neighboring gene transmembrane 9 superfamily member 2-like Neighboring gene uncharacterized LOC121110713

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding motif protein, X chromosome
Names
RNA binding motif protein X-linked
RNA binding motif protein, X-linked like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001079728.2 → NP_001073196.2  RNA-binding motif protein, X chromosome isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000071
    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3, Q5ZKQ9
    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  2. NM_001396945.1 → NP_001383874.1  RNA-binding motif protein, X chromosome isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000071
    UniProtKB/TrEMBL
    Q5ZKQ9

  3. NM_001396946.1 → NP_001383875.1  RNA-binding motif protein, X chromosome isoform 3

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000071
    UniProtKB/TrEMBL
    Q5ZKQ9
    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  4. NM_001396947.1 → NP_001383876.1  RNA-binding motif protein, X chromosome isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000071
    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3, Q5ZKQ9
    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  5. NM_001396948.1 → NP_001383877.1  RNA-binding motif protein, X chromosome isoform 3

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000071
    UniProtKB/TrEMBL
    Q5ZKQ9
    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4362727..4381750 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046940019.1 → XP_046795975.1  RNA-binding motif protein, X chromosome isoform X3

  2. XM_040698824.2 → XP_040554758.1  RNA-binding motif protein, X chromosome isoform X2

    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3, Q5ZKQ9
    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  3. XM_046940012.1 → XP_046795968.1  RNA-binding motif protein, X chromosome isoform X1

  4. XM_040698827.2 → XP_040554761.1  RNA-binding motif protein, X chromosome isoform X4

    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  5. XM_025149562.3 → XP_025005330.1  RNA-binding motif protein, X chromosome isoform X3

    UniProtKB/TrEMBL
    Q5ZKQ9
    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  6. XM_040698821.2 → XP_040554755.1  RNA-binding motif protein, X chromosome isoform X2

    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3, Q5ZKQ9
    Related
    ENSGALP00010022127.1, ENSGALT00010038312.1
    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  7. XM_046940011.1 → XP_046795967.1  RNA-binding motif protein, X chromosome isoform X1

  8. XM_040698826.2 → XP_040554760.1  RNA-binding motif protein, X chromosome isoform X3

    UniProtKB/TrEMBL
    Q5ZKQ9
    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  9. XM_040698822.2 → XP_040554756.1  RNA-binding motif protein, X chromosome isoform X2

    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3, Q5ZKQ9
    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  10. XM_046940013.1 → XP_046795969.1  RNA-binding motif protein, X chromosome isoform X1

  11. XM_040698823.2 → XP_040554757.1  RNA-binding motif protein, X chromosome isoform X2

    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3, Q5ZKQ9
    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  12. XM_046940014.1 → XP_046795970.1  RNA-binding motif protein, X chromosome isoform X1

  13. XM_046940020.1 → XP_046795976.1  RNA-binding motif protein, X chromosome isoform X3

  14. XM_046940018.1 → XP_046795974.1  RNA-binding motif protein, X chromosome isoform X2

    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3

  15. XM_046940016.1 → XP_046795972.1  RNA-binding motif protein, X chromosome isoform X2

    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3

  16. XM_040698825.2 → XP_040554759.1  RNA-binding motif protein, X chromosome isoform X2

    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3, Q5ZKQ9
    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  17. XM_046940015.1 → XP_046795971.1  RNA-binding motif protein, X chromosome isoform X2

    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4398213..4417236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046915809.1 → XP_046771765.1  RNA-binding motif protein, X chromosome isoform X3

  2. XM_046915801.1 → XP_046771757.1  RNA-binding motif protein, X chromosome isoform X2

    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3

  3. XM_046915796.1 → XP_046771752.1  RNA-binding motif protein, X chromosome isoform X1

  4. XM_046915807.1 → XP_046771763.1  RNA-binding motif protein, X chromosome isoform X3

  5. XM_046915799.1 → XP_046771755.1  RNA-binding motif protein, X chromosome isoform X2

    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3

  6. XM_046915795.1 → XP_046771751.1  RNA-binding motif protein, X chromosome isoform X1

  7. XM_046915808.1 → XP_046771764.1  RNA-binding motif protein, X chromosome isoform X3

  8. XM_046915800.1 → XP_046771756.1  RNA-binding motif protein, X chromosome isoform X2

    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3

  9. XM_046915797.1 → XP_046771753.1  RNA-binding motif protein, X chromosome isoform X1

  10. XM_046915804.1 → XP_046771760.1  RNA-binding motif protein, X chromosome isoform X2

    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3

  11. XM_046915798.1 → XP_046771754.1  RNA-binding motif protein, X chromosome isoform X1

  12. XM_046915810.1 → XP_046771766.1  RNA-binding motif protein, X chromosome isoform X3

  13. XM_046915805.1 → XP_046771761.1  RNA-binding motif protein, X chromosome isoform X2

    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3

  14. XM_046915803.1 → XP_046771759.1  RNA-binding motif protein, X chromosome isoform X2

    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3

  15. XM_046915806.1 → XP_046771762.1  RNA-binding motif protein, X chromosome isoform X2

    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3

  16. XM_046915802.1 → XP_046771758.1  RNA-binding motif protein, X chromosome isoform X2

    UniProtKB/TrEMBL
    A0A1L1RUD2, F1NZD3
Nucleotide Protein Strain
Heading Accession and Version

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