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TBC1D5 TBC1 domain family member 5 [ Gallus gallus (chicken) ]

Gene ID: 420646, updated on 3-Apr-2024

Summary

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Symbol
TBC1D5provided by CGNC
Full Name
TBC1 domain family member 5provided by CGNC
Primary source
CGNC:8548
See related
Ensembl:ENSGALG00010001521
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
25
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (34552670..34859876, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (34602318..34909279, complement)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121109771 Neighboring gene phospholipase C like 2 Neighboring gene uncharacterized LOC107052543 Neighboring gene uncharacterized LOC101752157 Neighboring gene SATB homeobox 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome analysis for the chicken based on 19,626 finished cDNA sequences and 485,337 expressed sequence tags. Hubbard SJ, et al. Genome Res, 2005 Jan. PMID 15590942, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TBC1 domain family member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    34552670..34859876 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015281811.4 → XP_015137297.1  TBC1 domain family member 5 isoform X3

    UniProtKB/TrEMBL
    A0A8V0X8Z7
    Related
    ENSGALP00010001957.1, ENSGALT00010003515.1
    Conserved Domains (1) summary
    smart00164
    Location:79 → 380
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  2. XM_015281808.4 → XP_015137294.1  TBC1 domain family member 5 isoform X2

    UniProtKB/TrEMBL
    A0A8V0X8Z7, A0A8V0XBV6
    Related
    ENSGALP00010001956.1, ENSGALT00010003514.1
    Conserved Domains (1) summary
    smart00164
    Location:79 → 380
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  3. XM_040696662.2 → XP_040552596.1  TBC1 domain family member 5 isoform X2

    UniProtKB/TrEMBL
    A0A8V0X8Z7, A0A8V0XBV6
    Conserved Domains (1) summary
    smart00164
    Location:79 → 380
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  4. XM_046929184.1 → XP_046785140.1  TBC1 domain family member 5 isoform X1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    34602318..34909279 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040664208.2 → XP_040520142.1  TBC1 domain family member 5 isoform X3

    UniProtKB/TrEMBL
    A0A8V0X8Z7
    Conserved Domains (1) summary
    smart00164
    Location:79 → 380
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  2. XM_040664204.2 → XP_040520138.1  TBC1 domain family member 5 isoform X2

    UniProtKB/TrEMBL
    A0A8V0X8Z7, A0A8V0XBV6
    Conserved Domains (1) summary
    smart00164
    Location:79 → 380
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  3. XM_040664205.2 → XP_040520139.1  TBC1 domain family member 5 isoform X2

    UniProtKB/TrEMBL
    A0A8V0X8Z7, A0A8V0XBV6
    Conserved Domains (1) summary
    smart00164
    Location:79 → 380
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  4. XM_046912052.1 → XP_046768008.1  TBC1 domain family member 5 isoform X1

Nucleotide Protein Strain
Heading Accession and Version

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