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OTUD1 OTU deubiquitinase 1 [ Gallus gallus (chicken) ]

Gene ID: 420502, updated on 5-Mar-2024

Summary

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Symbol
OTUD1provided by CGNC
Full Name
OTU deubiquitinase 1provided by CGNC
Primary source
CGNC:66376
See related
Ensembl:ENSGALG00010004707
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (17264011..17266531, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (17291508..17294028, complement)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 21 Neighboring gene uncharacterized LOC121109773 Neighboring gene KIAA1217 Neighboring gene C10ORF67 homolog Neighboring gene pancreas specific transcription factor, 1a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
OTU domain-containing protein 1
Names
OTU domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    17264011..17266531 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_418604.8 → XP_418604.5  OTU domain-containing protein 1

    UniProtKB/TrEMBL
    A0A8V0XN55
    Related
    ENSGALP00010006242.1, ENSGALT00010010921.1
    Conserved Domains (1) summary
    pfam02338
    Location:212 → 329
    OTU; OTU-like cysteine protease

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    17291508..17294028 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040663449.2 → XP_040519383.1  OTU domain-containing protein 1

    Conserved Domains (1) summary
    PRK14951
    Location:13 → 149
    PRK14951; DNA polymerase III subunits gamma and tau; Provisional
Nucleotide Protein
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