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ZBTB8OS zinc finger and BTB domain containing 8 opposite strand [ Gallus gallus (chicken) ]

Gene ID: 419663, updated on 3-Apr-2024

Summary

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Symbol
ZBTB8OSprovided by CGNC
Full Name
zinc finger and BTB domain containing 8 opposite strandprovided by CGNC
Primary source
CGNC:51055
See related
Ensembl:ENSGALG00010017636
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 23
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 23 NC_052554.1 (5587029..5590968, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 23 NC_052595.1 (5350333..5354259, complement)

Chromosome 23 - NC_052554.1Genomic Context describing neighboring genes Neighboring gene microRNA 6637-1 Neighboring gene zinc finger and BTB domain containing 8A Neighboring gene microRNA 6637-2 Neighboring gene zinc finger and BTB domain containing 8A-like Neighboring gene RB binding protein 4, chromatin remodeling factor Neighboring gene syncoilin, intermediate filament protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome analysis for the chicken based on 19,626 finished cDNA sequences and 485,337 expressed sequence tags. Hubbard SJ, et al. Genome Res, 2005 Jan. PMID 15590942, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in tRNA splicing, via endonucleolytic cleavage and ligation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of tRNA-splicing ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein archease
Names
archease

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052554.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5587029..5590968 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040651803.2 → XP_040507737.1  protein archease

    UniProtKB/TrEMBL
    A0A8V0Z3P6, F1NMM3
    Related
    ENSGALP00010025107.1, ENSGALT00010042617.1
    Conserved Domains (1) summary
    pfam01951
    Location:28 → 164
    Archease; Archease protein family (MTH1598/TM1083)

  2. XM_001233489.6 → XP_001233490.1  protein archease

    See identical proteins and their annotated locations for XP_001233490.1

    UniProtKB/TrEMBL
    A0A8V0Z3P6, F1NMM3
    Related
    ENSGALP00010025108.1, ENSGALT00010042618.1
    Conserved Domains (1) summary
    pfam01951
    Location:28 → 164
    Archease; Archease protein family (MTH1598/TM1083)

  3. XM_046903598.1 → XP_046759554.1  protein archease

    UniProtKB/TrEMBL
    F1NMM3

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052595.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5350333..5354259 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040689857.2 → XP_040545791.1  protein archease

    UniProtKB/TrEMBL
    A0A8V0Z3P6, F1NMM3
    Conserved Domains (1) summary
    pfam01951
    Location:28 → 164
    Archease; Archease protein family (MTH1598/TM1083)

  2. XM_040689855.2 → XP_040545789.1  protein archease

    UniProtKB/TrEMBL
    A0A8V0Z3P6, F1NMM3
    Conserved Domains (1) summary
    pfam01951
    Location:28 → 164
    Archease; Archease protein family (MTH1598/TM1083)

  3. XM_046932079.1 → XP_046788035.1  protein archease

    UniProtKB/TrEMBL
    F1NMM3
Nucleotide Protein Strain
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