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ARID2 AT-rich interaction domain 2 [ Gallus gallus (chicken) ]

Gene ID: 417804, updated on 3-Apr-2024

Summary

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Symbol
ARID2provided by CGNC
Full Name
AT-rich interaction domain 2provided by CGNC
Primary source
CGNC:7350
See related
Ensembl:ENSGALG00010013878
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
24
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (30890702..30999137)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (31227949..31335926)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121109001 Neighboring gene uncharacterized LOC124417320 Neighboring gene uncharacterized LOC121109002 Neighboring gene uncharacterized LOC121113294 Neighboring gene SR-related CTD-associated factor 11 Neighboring gene solute carrier family 38 member 1 Neighboring gene uncharacterized LOC101749506

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SWI/SNF superfamily-type complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AT-rich interactive domain-containing protein 2
Names
AT rich interactive domain 2 (ARID, RFX-like)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    30890702..30999137
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004937552.5 → XP_004937609.2  AT-rich interactive domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P2P6, A0A8V0YTV6
    Related
    ENSGALP00010019654.1, ENSGALT00010033293.1
    Conserved Domains (1) summary
    cd16866
    Location:15 → 102
    ARID_ARID2; ARID/BRIGHT DNA binding domain of AT-rich interactive domain-containing protein 2 (ARID2) and similar proteins

  2. XM_416046.8 → XP_416046.3  AT-rich interactive domain-containing protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YFP1
    Related
    ENSGALP00010019663.1, ENSGALT00010033312.1

  3. XM_040702427.2 → XP_040558361.1  AT-rich interactive domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YNT9
    Related
    ENSGALP00010019651.1, ENSGALT00010033287.1
    Conserved Domains (1) summary
    cl28902
    Location:42 → 81
    ARID; ARID/BRIGHT DNA binding domain family

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    31227949..31335926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040657386.2 → XP_040513320.1  AT-rich interactive domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P2P6
    Conserved Domains (1) summary
    cd16866
    Location:15 → 102
    ARID_ARID2; ARID/BRIGHT DNA binding domain of AT-rich interactive domain-containing protein 2 (ARID2) and similar proteins

  2. XM_040657388.2 → XP_040513322.2  AT-rich interactive domain-containing protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YFP1

  3. XM_040657387.2 → XP_040513321.1  AT-rich interactive domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YNT9
    Conserved Domains (1) summary
    cl28902
    Location:42 → 81
    ARID; ARID/BRIGHT DNA binding domain family
Nucleotide Protein
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