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WDR34 WD repeat domain 34 [ Gallus gallus (chicken) ]

Gene ID: 417211, updated on 5-Mar-2024

Summary

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Symbol
WDR34provided by CGNC
Full Name
WD repeat domain 34provided by CGNC
Primary source
CGNC:3484
See related
Ensembl:ENSGALG00010028559
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (5861014..5868908, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (5274992..5284201, complement)

Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene outer dense fiber of sperm tails 2 Neighboring gene GLE1, RNA export mediator Neighboring gene spectrin alpha, non-erythrocytic 1 Neighboring gene uncharacterized LOC107052167 Neighboring gene uncharacterized LOC112529986 Neighboring gene SET nuclear proto-oncogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dynein heavy chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables dynein light chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intraciliary transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary plasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of cytoplasmic dynein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat-containing protein 34; cytoplasmic dynein 2 intermediate chain 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5861014..5868908 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_415494.8 → XP_415494.2  cytoplasmic dynein 2 intermediate chain 2 isoform X1

    UniProtKB/TrEMBL
    F1NIH1
    Related
    ENSGALP00010042619.1, ENSGALT00010069177.1
    Conserved Domains (3) summary
    COG2319
    Location:149 → 486
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:128 → 179
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:181 → 475
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5274992..5284201 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040685911.2 → XP_040541845.1  cytoplasmic dynein 2 intermediate chain 2 isoform X3

    Conserved Domains (2) summary
    COG2319
    Location:225 → 524
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:172 → 223
    7WD40; WD40 repeat [structural motif]

  2. XM_040685910.2 → XP_040541844.1  cytoplasmic dynein 2 intermediate chain 2 isoform X2

    Conserved Domains (2) summary
    COG2319
    Location:230 → 529
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:234 → 272
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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