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OVOL3 ovo like zinc finger 3 [ Gallus gallus (chicken) ]

Gene ID: 416720, updated on 5-Mar-2024

Summary

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Symbol
OVOL3provided by CGNC
Full Name
ovo like zinc finger 3provided by CGNC
Primary source
CGNC:6606
See related
Ensembl:ENSGALG00010018668
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
OVOL2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (15146976..15154079)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (15054111..15068338)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene lysine acetyltransferase 14 Neighboring gene protein PET117 homolog, mitochondrial Neighboring gene uncharacterized LOC107052871 Neighboring gene mitochondrial genome maintenance exonuclease 1 Neighboring gene sorting nexin 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The zinc finger transcription factor Ovol2 acts downstream of the bone morphogenetic protein pathway to regulate the cell fate decision between neuroectoderm and mesendoderm. Zhang T, et al. J Biol Chem, 2013 Mar 1. PMID 23319585, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Ovol2 acts downstream of the BMP pathway in the cell fate decision between neuroectoderm and mesendoderm to ensure proper germ layer development.
    Title: The zinc finger transcription factor Ovol2 acts downstream of the bone morphogenetic protein pathway to regulate the cell fate decision between neuroectoderm and mesendoderm.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in epidermal cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor Ovo-like 2
Names
ovo like zinc finger 2
ovo-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    15146976..15154079
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_415018.8 → XP_415018.5  transcription factor Ovo-like 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z737
    Related
    ENSGALP00010026960.1, ENSGALT00010045139.1
    Conserved Domains (3) summary
    COG5048
    Location:107 → 159
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:160 → 209
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:110 → 130
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    15054111..15068338
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040668049.2 → XP_040523983.2  transcription factor Ovo-like 2 isoform X2

  2. XM_046915042.1 → XP_046770998.1  transcription factor Ovo-like 2 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

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