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cyb5b cytochrome b5 type B [ Danio rerio (zebrafish) ]

Gene ID: 405812, updated on 27-Mar-2024

Summary

Official Symbol
cyb5bprovided by ZNC
Official Full Name
cytochrome b5 type Bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-2614
See related
Ensembl:ENSDARG00000099774 AllianceGenome:ZFIN:ZDB-GENE-040426-2614
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:76963
Summary
Enables heme binding activity and oxidoreductase activity. Predicted to be integral component of membrane. Predicted to be active in intracellular membrane-bounded organelle and membrane. Orthologous to human CYB5B (cytochrome b5 type B). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (67733784..67744619)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (67510432..67521267)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene zgc:162592 Neighboring gene uncharacterized LOC108190732 Neighboring gene DEAH (Asp-Glu-Ala-His) box polypeptide 38 Neighboring gene uncharacterized LOC108190733

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Clone Names

  • MGC76963

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables heme binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables heme binding IDA
Inferred from Direct Assay
more info
PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables oxidoreductase activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
is_active_in intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_212876.1NP_998041.1  cytochrome b5 type B

    See identical proteins and their annotated locations for NP_998041.1

    Status: PROVISIONAL

    Source sequence(s)
    BC066748
    UniProtKB/TrEMBL
    A0A8M1PIK8, Q6NY41
    Related
    ENSDARP00000138902.1, ENSDART00000172015.2
    Conserved Domains (1) summary
    pfam00173
    Location:29102
    Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    67733784..67744619
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)