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PLS1 plastin 1 [ Gallus gallus (chicken) ]

Gene ID: 396291, updated on 3-Apr-2024

Summary

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Symbol
PLS1provided by CGNC
Full Name
plastin 1provided by CGNC
Primary source
CGNC:1904
See related
Ensembl:ENSGALG00010015774
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
plastin-1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
19
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (10160485..10198792)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (9961781..10000102)

Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene 5'-3' exoribonuclease 1 Neighboring gene ATR serine/threonine kinase Neighboring gene transient receptor potential cation channel subfamily C member 1 Neighboring gene procollagen C-endopeptidase enhancer 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Fimbrin is a homologue of the cytoplasmic phosphoprotein plastin and has domains homologous with calmodulin and actin gelation proteins. de Arruda MV, et al. J Cell Biol, 1990 Sep. PMID 2391360, Free PMC Article
  2. Ca(2+)-regulated actin and phospholipid binding protein (68 kD-protein) from bovine liver: identification as a homologue for annexin VI and intracellular localization. Hosoya H, et al. Cell Motil Cytoskeleton, 1992. PMID 1423665
  3. Proteomic studies of Syk-interacting proteins using a novel amine-specific isotope tag and GFP nanotrap. Galan JA, et al. J Am Soc Mass Spectrom, 2011 Feb. PMID 21472591, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in actin filament network formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin filament bundle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plastin-1
Names
I-plastin
fimbrin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001396115.1 → NP_001383044.1  plastin-1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000240
    UniProtKB/Swiss-Prot
    P19179
    UniProtKB/TrEMBL
    A0A8V0YT67
    Related
    ENSGALP00010021919.1, ENSGALT00010037994.1
    Conserved Domains (3) summary
    COG5069
    Location:20 → 622
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
    cd21323
    Location:100 → 244
    CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
    cd21329
    Location:392 → 509
    CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

  2. NM_001396116.1 → NP_001383045.1  plastin-1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000240
    UniProtKB/Swiss-Prot
    P19179
    UniProtKB/TrEMBL
    A0A8V0YT67
    Conserved Domains (3) summary
    COG5069
    Location:20 → 622
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
    cd21323
    Location:100 → 244
    CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
    cd21329
    Location:392 → 509
    CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

  3. NM_001396117.1 → NP_001383046.1  plastin-1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000240
    UniProtKB/Swiss-Prot
    P19179
    UniProtKB/TrEMBL
    A0A8V0YT67
    Conserved Domains (3) summary
    COG5069
    Location:20 → 622
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
    cd21323
    Location:100 → 244
    CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
    cd21329
    Location:392 → 509
    CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

  4. NM_001396118.1 → NP_001383047.1  plastin-1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000240
    UniProtKB/Swiss-Prot
    P19179
    UniProtKB/TrEMBL
    A0A8V0YT67
    Related
    ENSGALP00010021912.1, ENSGALT00010037981.1
    Conserved Domains (3) summary
    COG5069
    Location:20 → 622
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
    cd21323
    Location:100 → 244
    CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
    cd21329
    Location:392 → 509
    CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

  5. NM_205347.2 → NP_990678.1  plastin-1

    See identical proteins and their annotated locations for NP_990678.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000240
    UniProtKB/Swiss-Prot
    P19179
    UniProtKB/TrEMBL
    A0A8V0YT67
    Conserved Domains (3) summary
    COG5069
    Location:20 → 622
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
    cd21323
    Location:100 → 244
    CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
    cd21329
    Location:392 → 509
    CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    10160485..10198792
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046898340.1 → XP_046754296.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179

  2. XM_046898339.1 → XP_046754295.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179

  3. XM_040705483.2 → XP_040561417.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179
    UniProtKB/TrEMBL
    A0A8V0YT67
    Conserved Domains (3) summary
    COG5069
    Location:20 → 622
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
    cd21323
    Location:100 → 244
    CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
    cd21329
    Location:392 → 509
    CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

  4. XM_040705486.2 → XP_040561420.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179
    UniProtKB/TrEMBL
    A0A8V0YT67
    Conserved Domains (3) summary
    COG5069
    Location:20 → 622
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
    cd21323
    Location:100 → 244
    CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
    cd21329
    Location:392 → 509
    CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

  5. XM_046898335.1 → XP_046754291.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179

  6. XM_046898337.1 → XP_046754293.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179

  7. XM_040705484.2 → XP_040561418.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179
    UniProtKB/TrEMBL
    A0A8V0YT67
    Conserved Domains (3) summary
    COG5069
    Location:20 → 622
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
    cd21323
    Location:100 → 244
    CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
    cd21329
    Location:392 → 509
    CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

  8. XM_046898338.1 → XP_046754294.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179

  9. XM_046898336.1 → XP_046754292.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179
    Related
    ENSGALP00010021917.1, ENSGALT00010037990.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    9961781..10000102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046923682.1 → XP_046779638.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179

  2. XM_046923676.1 → XP_046779632.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179

  3. XM_046923679.1 → XP_046779635.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179

  4. XM_046923675.1 → XP_046779631.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179

  5. XM_046923680.1 → XP_046779636.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179

  6. XM_046923681.1 → XP_046779637.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179

  7. XM_046923678.1 → XP_046779634.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179

  8. XM_046923683.1 → XP_046779639.1  plastin-1 isoform X1

    UniProtKB/Swiss-Prot
    P19179
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P19179.1 GenPept UniProtKB/Swiss-Prot:P19179

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