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RPL21 ribosomal protein L21 [ Bos taurus (cattle) ]

Gene ID: 326584, updated on 5-Mar-2024

Summary

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Gene symbol
RPL21
Gene description
ribosomal protein L21
See related
BGD:BT27342; Ensembl:ENSBTAG00000001648
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
RPL21P16
Orthologs
human mouse all
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Genomic context

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See RPL21 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 12 NC_037339.1 (32614865..32621617, complement)

Chromosome 12 - NC_037339.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104973577 Neighboring gene RAS like family 11 member A Neighboring gene small nucleolar RNA SNORA27 Neighboring gene small nucleolar RNA SNORD102 Neighboring gene uncharacterized LOC132346763 Neighboring gene ubiquitin specific peptidase 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037339.1 Chromosome 12 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of gene expression profiles in early bovine pregnancy using a custom cDNA microarray. Ishiwata H, et al. Mol Reprod Dev, 2003 May. PMID 12658628

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
large ribosomal subunit protein eL21
Names
ribosomal protein L21 pseudogene 16
NP_001178341.1
XP_005213818.1
XP_005213819.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001191412.1 → NP_001178341.1  large ribosomal subunit protein eL21

    See identical proteins and their annotated locations for NP_001178341.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000012
    UniProtKB/TrEMBL
    Q861S4
    Related
    ENSBTAP00000002160.3, ENSBTAT00000002160.5
    Conserved Domains (1) summary
    PTZ00189
    Location:1 → 160
    PTZ00189; 60S ribosomal protein L21; Provisional

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037339.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    32614865..32621617 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005213761.4 → XP_005213818.1  large ribosomal subunit protein eL21 isoform X1

    See identical proteins and their annotated locations for XP_005213818.1

    UniProtKB/TrEMBL
    Q861S4
    Conserved Domains (1) summary
    PTZ00189
    Location:1 → 160
    PTZ00189; 60S ribosomal protein L21; Provisional

  2. XM_005213762.5 → XP_005213819.1  large ribosomal subunit protein eL21 isoform X1

    See identical proteins and their annotated locations for XP_005213819.1

    UniProtKB/TrEMBL
    Q861S4
    Conserved Domains (1) summary
    PTZ00189
    Location:1 → 160
    PTZ00189; 60S ribosomal protein L21; Provisional
Nucleotide Protein Strain
Heading Accession and Version

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