U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Mss51 MSS51 mitochondrial translational activator [ Rattus norvegicus (Norway rat) ]

Gene ID: 289904, updated on 3-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
Mss51provided by RGD
Official Full Name
MSS51 mitochondrial translational activatorprovided by RGD
Primary source
RGD:1309408
See related
Ensembl:ENSRNOG00000007632 AllianceGenome:RGD:1309408
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Zmynd17
Summary
Predicted to enable metal ion binding activity. Orthologous to human MSS51 (MSS51 mitochondrial translational activator). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Muscle (RPKM 831.6), Thymus (RPKM 98.5) and 6 other tissues See more
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
15p16
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 15 NC_086033.1 (3855094..3868614)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 15 NC_051350.1 (3805240..3819385)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 15 NC_005114.4 (4240203..4252072)

Chromosome 15 - NC_086033.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 54 Neighboring gene small nucleolar RNA SNORA68 Neighboring gene uncharacterized LOC103693236 Neighboring gene protein phosphatase 3 catalytic subunit beta Neighboring gene 60S ribosomal protein L15-like Neighboring gene uncharacterized LOC134482077 Neighboring gene annexin A7 Neighboring gene cilia and flagella associated protein 70

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. ANXA7, PPP3CB, DNAJC9, and ZMYND17 genes at chromosome 10q22 associated with the subgroup of schizophrenia with deficits in attention and executive function. Liu CM, et al. Biol Psychiatry, 2011 Jul 1. PMID 21531385

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
putative protein MSS51 homolog, mitochondrial
Names
MSS51 mitochondrial translational activator homolog
zinc finger MYND domain-containing protein 17
zinc finger, MYND domain containing 17
zinc finger, MYND-type containing 17

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001106025.1 → NP_001099495.1  putative protein MSS51 homolog, mitochondrial

    See identical proteins and their annotated locations for NP_001099495.1

    Status: PROVISIONAL

    Source sequence(s)
    CH474061
    UniProtKB/Swiss-Prot
    D3ZKV9
    Related
    ENSRNOP00000010179.3, ENSRNOT00000010178.4
    Conserved Domains (1) summary
    pfam01753
    Location:104 → 148
    zf-MYND; MYND finger

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086033.1 Reference GRCr8

    Range
    3855094..3868614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063274068.1 → XP_063130138.1  putative protein MSS51 homolog, mitochondrial isoform X1

    UniProtKB/Swiss-Prot
    D3ZKV9

  2. XM_039093085.2 → XP_038949013.1  putative protein MSS51 homolog, mitochondrial isoform X2

    Conserved Domains (1) summary
    pfam01753
    Location:104 → 148
    zf-MYND; MYND finger
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
D3ZKV9.1 GenPept UniProtKB/Swiss-Prot:D3ZKV9

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials
Tools
Miscellaneous