1: betA choline dehydrogenase [ Pectobacterium atrosepticum SCRI1043 ]

GeneID: 2882565 created 10-Jul-2004

[Top][Help]Summary

Gene description
choline dehydrogenase
Locus Tag
ECA1746
Gene type
protein coding
RefSeq status
Validated
Organism
Pectobacterium atrosepticum SCRI1043
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium

[Top][Help]Genomic regions, transcripts, and products

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Related Articles in PubMed

[Top][Help]General gene information

misc_feature
Loc: 1994840-1996408 HMMPfam hit to PF00732, DE GMC oxidoreductase, score 8.3e-280
Loc: 1995077-1995148 PS00623 GMC oxidoreductases signature 1.
Loc: 1995602-1995646 PS00624 GMC oxidoreductases signature 2.

Pathways

KEGG pathway: Glycine, serine and threonine metabolism
00260

[Top][Help]General protein information

Names
choline dehydrogenase
YP_049846.1
EC 1.1.99.1
catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine

[Top][Help]NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

mRNA and Protein(s)

  1. YP_049846.1 choline dehydrogenase [Pectobacterium atrosepticum SCRI1043]

    UniProtKB/Swiss-Prot
    Q6D6D9
    Conserved Domains (3) summary
    pfam00732
    Location:73 – 299
    Blast Score: 515
    GMC_oxred_N; GMC oxidoreductase
    pfam05199
    Location:389 – 525
    Blast Score: 464
    GMC_oxred_C; GMC oxidoreductase
    PRK02106
    Location:1 – 557
    Blast Score: 2959
    PRK02106; choline dehydrogenase; Validated

[Top][Help]Related Sequences

  Nucleotide   Protein
  genomic   BX950851.1   CAG74651.1

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