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btb1 BTB/POZ domain protein Btb1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2538714, updated on 11-Apr-2024

Summary

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Gene symbol
btb1
Gene description
BTB/POZ domain protein Btb1
Primary source
PomBase:SPCC330.11
Locus tag
SPCC330.11
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (131517..135560)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene putative rRNA processing protein Enp2 Neighboring gene P-TEFb-cap methyltransferase Pcm1 Neighboring gene miscRNA Neighboring gene succinate dehydrogenase cytochrome B subunit Neighboring gene putative DNA-directed RNA polymerase III complex subunit Rpc37

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BTB/POZ domain proteins are putative substrate adaptors for cullin 3 ubiquitin ligases. Geyer R, et al. Mol Cell, 2003 Sep. PMID 14527422
  2. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
  3. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
  4. Chromatin remodeller Fun30(Fft3) induces nucleosome disassembly to facilitate RNA polymerase II elongation. Lee J, et al. Nat Commun, 2017 Feb 20. PMID 28218250, Free PMC Article
  5. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables ubiquitin-like ligase-substrate adaptor activity ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
part_of ubiquitin ligase complex IPI
Inferred from Physical Interaction
more info
 PubMed 

General protein information

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Preferred Names
BTB/POZ domain protein Btb1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    131517..135560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022706.1 → NP_587711.1  BTB/POZ domain protein Btb1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_587711.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74881
    Conserved Domains (9) summary
    smart00225
    Location:759 → 871
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5184
    Location:182 → 764
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    cd00204
    Location:45 → 127
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00415
    Location:266 → 320
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00651
    Location:615 → 726
    BTB; BTB/POZ domain
    pfam13540
    Location:249 → 277
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13637
    Location:52 → 107
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:51 → 83
    ANK; ANK repeat [structural motif]
    cl02518
    Location:753 → 868
    BTB; BTB/POZ domain
Nucleotide Protein
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