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fen flap endonuclease-1 [ Methanothermobacter thermautotrophicus str. Delta H ]

Gene ID: 1470718, updated on 29-Sep-2023

Summary

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Gene symbol
fen
Gene description
flap endonuclease-1
Locus tag
MTH_RS07825
Gene type
protein coding
Organism
Methanothermobacter thermautotrophicus str. Delta H (strain: Delta H, synonym: Methanobacterium thermoautotrophicum str. deltaH, type-material: type strain of Methanobacterium thermautotrophicum)
Lineage
Archaea; Euryarchaeota; Methanomada group; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter
Old locus tag
MTH1633; MTH_1633
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Genomic context

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Location:
clone: MTH
Sequence:
NC_000916.1 (1497550..1498536)

NC_000916.1Genomic Context describing neighboring genes Neighboring gene homocitrate synthase family protein Neighboring gene homoaconitase large subunit Neighboring gene chorismate pyruvate-lyase family protein Neighboring gene IGHMBP2 family helicase Neighboring gene DUF2119 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000916.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular structure and novel DNA binding sites located in loops of flap endonuclease-1 from Pyrococcus horikoshii. Matsui E, et al. J Biol Chem, 2002 Oct 4. PMID 12147694
  2. Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics. Smith DR, et al. J Bacteriol, 1997 Nov. PMID 9371463, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
flap endonuclease-1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000916.1 Reference assembly

    Range
    1497550..1498536
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010877241.1 flap endonuclease-1 [Methanothermobacter thermautotrophicus]

    See identical proteins and their annotated locations for WP_010877241.1

    UniProtKB/Swiss-Prot
    O27670
    UniProtKB/TrEMBL
    A0A7J4MXK2
    Conserved Domains (3) summary
    cd09903
    Location:215 → 278
    H3TH_FEN1-Arc; H3TH domain of Flap Endonuclease-1, a structure-specific, divalent-metal-ion dependent, 5' nuclease: Archaeal homologs
    cd09867
    Location:3 → 328
    PIN_FEN1; PIN domain of Flap Endonuclease-1, a structure-specific, divalent-metal-ion dependent, 5' nuclease and homologs
    TIGR03674
    Location:1 → 328
    fen_arch; flap structure-specific endonuclease
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O27670.1

Gene LinkOut

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