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YJR112W-A uncharacterized protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 1466470, updated on 7-Sep-2023

Summary

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Gene symbol
YJR112W-A
Gene description
uncharacterized protein
Primary source
SGD:S000028513
Locus tag
YJR112W-A
See related
AllianceGenome:SGD:S000028513
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in endoplasmic reticulum. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: X
Exon count:
2
Sequence:
Chromosome: X; NC_001142.9 (637790..638168)

Chromosome X - NC_001142.9Genomic Context describing neighboring genes Neighboring gene Pxp2p Neighboring gene MIND complex subunit NNF1 Neighboring gene mitochondrial 37S ribosomal protein RSM7 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001142.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii. Brachat S, et al. Genome Biol, 2003. PMID 12844361, Free PMC Article
  2. Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X. Galibert F, et al. EMBO J, 1996 May 1. PMID 8641269, Free PMC Article
  3. La-motif-dependent mRNA association with Slf1 promotes copper detoxification in yeast. Schenk L, et al. RNA, 2012 Mar. PMID 22271760, Free PMC Article
  4. One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy. Yofe I, et al. Nat Methods, 2016 Apr. PMID 26928762, Free PMC Article
  5. Purification of nuclear poly(A)-binding protein Nab2 reveals association with the yeast transcriptome and a messenger ribonucleoprotein core structure. Batisse J, et al. J Biol Chem, 2009 Dec 11. PMID 19840948, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in endoplasmic reticulum HDA PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_878107.1
  • hypothetical protein; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; identified based on homology to Ashbya gossypii

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001142.9 Reference assembly

    Range
    637790..638168
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001184523.1 → NP_878107.1  TPA: uncharacterized protein YJR112W-A [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_878107.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VWT2, Q3E743
    UniProtKB/TrEMBL
    A6ZQ69, B3LQJ7, C8ZBR1, G2WHB6
    Conserved Domains (1) summary
    pfam04892
    Location:23 → 105
    VanZ; VanZ like family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3E743.1

Gene LinkOut

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