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PH_RS02320 RNA ligase [ Pyrococcus horikoshii OT3 ]

Gene ID: 1444389, updated on 24-Dec-2022

Summary

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Gene symbol
PH_RS02320
Gene description
RNA ligase
Locus tag
PH_RS02320
Gene type
protein coding
Organism
Pyrococcus horikoshii OT3 (strain: OT3, type-material: type strain of Pyrococcus horikoshii)
Lineage
Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus
Old locus tag
PH0498
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Genomic context

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Sequence:
NC_000961.1 (450188..451327, complement)

NC_000961.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene CheF family chemotaxis protein Neighboring gene glycerate kinase Neighboring gene PIG-L deacetylase family protein Neighboring gene type II toxin-antitoxin system VapC family toxin Neighboring gene hypothetical protein Neighboring gene beta-galactosidase BgaS

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000961.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The structure of an archaeal homodimeric ligase which has RNA circularization activity. Brooks MA, et al. Protein Sci, 2008 Aug. PMID 18511537, Free PMC Article
  2. Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3. Kawarabayasi Y, et al. DNA Res, 1998 Apr 30. PMID 9679194

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
RNA ligase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000961.1 Reference assembly

    Range
    450188..451327 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010884602.1 RNA ligase [Pyrococcus horikoshii]

    See identical proteins and their annotated locations for WP_010884602.1

    UniProtKB/TrEMBL
    A0A832SMC6, O58234
    Conserved Domains (2) summary
    COG1793
    Location:63 → 239
    CDC9; ATP-dependent DNA ligase [Replication, recombination and repair]
    TIGR01209
    Location:9 → 378
    TIGR01209; RNA ligase, Pab1020 family
Nucleotide Protein
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Gene LinkOut

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Other Literature Sources
Molecular Biology Databases