Gene description

peptide deformylase

Locus Tag

SO_2530

Gene type

protein coding

RefSeq status

Reviewed

Organism

Shewanella oneidensis MR-1

Lineage

Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella

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Names

peptide deformylase

NP_718116.1

EC 3.5.1.88

cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

mRNA and Protein(s)

1. NP_718116.1 peptide deformylase [Shewanella oneidensis MR-1]

   UniProtKB/Swiss-Prot

   Q8EE60

   Conserved Domains (1) summary

   cd00487
   Location:6 – 143
   Blast Score: 421

   Pep_deformylase; Polypeptide or peptide deformylase; a family of metalloenzymes that catalyzes the removal of the N-terminal formyl group in a growing polypeptide chain following translation initiation during protein synthesis in prokaryotes. These enzymes utilize Fe...