U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Clole_0109 alpha amylase [ Clostridium lentocellum DSM 5427 ]

Gene ID: 10329762, discontinued on 6-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:

Summary

Go to the top of the page Help
Gene symbol
Clole_0109
Gene description
alpha amylase
Locus tag
Clole_0109
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Clostridium lentocellum DSM 5427 (strain: DSM 5427)
Lineage
Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum
NEW
Try the new Gene table
Try the new Transcript table

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_015275.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General protein information

Go to the top of the page Help
Names
alpha amylase
YP_004307066.1
  • KEGG: cac:CA_P0168 alpha-amylase
    PFAM: glycosyl hydrolase, family 13, catalytic domain; carbohydrate binding domain, family 25
    SMART: glycosyl hydrolase, family 13, subfamily, catalytic domain; alpha-amylase, C-terminal all beta

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_015275.1 Reference assembly

    Range
    162740..165070 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_004307066.1 alpha amylase catalytic subunit [Clostridium lentocellum DSM 5427]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version