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RNF138 ring finger protein 138 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101694549, updated on 8-Mar-2024

Summary

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Gene symbol
RNF138
Gene description
ring finger protein 138
See related
Ensembl:ENSMPUG00000006982
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422010.1 (27197569..27237681)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569150.1 (26051623..26091095)

NW_025422010.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123387630 Neighboring gene ring finger protein 125 Neighboring gene U6 spliceosomal RNA Neighboring gene meprin A subunit beta Neighboring gene GRB2 associated regulator of MAPK1 subtype 1 Neighboring gene uncharacterized LOC123387632

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF138

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422010.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    27197569..27237681
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004742888.3 → XP_004742945.1  E3 ubiquitin-protein ligase RNF138 isoform X1

    See identical proteins and their annotated locations for XP_004742945.1

    UniProtKB/TrEMBL
    G9KLE1, M3Y6H5
    Conserved Domains (3) summary
    cd16544
    Location:14 → 59
    RING-HC_RNF138; RING finger, HC subclass, found in RING finger protein 138 (RNF138) and similar proteins
    pfam05605
    Location:156 → 215
    zf-Di19; Drought induced 19 protein (Di19), zinc-binding
    pfam18574
    Location:80 → 112
    zf_C2HC_14; C2HC Zing finger domain

  2. XM_004742890.3 → XP_004742947.1  E3 ubiquitin-protein ligase RNF138 isoform X2

    UniProtKB/TrEMBL
    A0A8U0SR43, G9KLE1
    Conserved Domains (2) summary
    pfam18574
    Location:80 → 112
    zf_C2HC_14; C2HC Zing finger domain
    cl17238
    Location:14 → 59
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

  3. XM_004742894.3 → XP_004742951.1  E3 ubiquitin-protein ligase RNF138 isoform X4

    See identical proteins and their annotated locations for XP_004742951.1

    UniProtKB/TrEMBL
    A0A8U0MG43
    Conserved Domains (2) summary
    pfam05605
    Location:62 → 121
    zf-Di19; Drought induced 19 protein (Di19), zinc-binding
    cl17238
    Location:14 → 37
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

  4. XM_004742891.3 → XP_004742948.1  E3 ubiquitin-protein ligase RNF138 isoform X3

    UniProtKB/TrEMBL
    A0A8U0MIW8
    Conserved Domains (2) summary
    cd16544
    Location:14 → 59
    RING-HC_RNF138; RING finger, HC subclass, found in RING finger protein 138 (RNF138) and similar proteins
    pfam18574
    Location:80 → 112
    zf_C2HC_14; C2HC Zing finger domain

  5. XM_004742889.3 → XP_004742946.1  E3 ubiquitin-protein ligase RNF138 isoform X1

    See identical proteins and their annotated locations for XP_004742946.1

    UniProtKB/TrEMBL
    G9KLE1, M3Y6H5
    Related
    ENSMPUP00000006926.1
    Conserved Domains (3) summary
    cd16544
    Location:14 → 59
    RING-HC_RNF138; RING finger, HC subclass, found in RING finger protein 138 (RNF138) and similar proteins
    pfam05605
    Location:156 → 215
    zf-Di19; Drought induced 19 protein (Di19), zinc-binding
    pfam18574
    Location:80 → 112
    zf_C2HC_14; C2HC Zing finger domain

RNA

  1. XR_006602089.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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