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RUNX3 RUNX family transcription factor 3 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101137492, updated on 14-Mar-2024

Summary

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Gene symbol
RUNX3
Gene description
RUNX family transcription factor 3
See related
Ensembl:ENSGGOG00000004848
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 1 NC_073224.2 (214881264..214946838)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 1 NC_073224.1 (31028391..31094199, complement)

Chromosome 1 - NC_073224.2Genomic Context describing neighboring genes Neighboring gene SYF2 pre-mRNA splicing factor Neighboring gene interferon-induced transmembrane protein 3-like Neighboring gene chloride intracellular channel 4 Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA U13 Neighboring gene serine and arginine repetitive matrix 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondrocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hemopoiesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ossification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
runt-related transcription factor 3
Names
runt related transcription factor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073224.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    214881264..214946838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004025187.5 → XP_004025236.2  runt-related transcription factor 3 isoform X2

    UniProtKB/TrEMBL
    G3S3J4
    Conserved Domains (3) summary
    PHA03247
    Location:190 → 324
    PHA03247; large tegument protein UL36; Provisional
    pfam00853
    Location:75 → 196
    Runt; Runt domain
    pfam08504
    Location:329 → 428
    RunxI; Runx inhibition domain

  2. XM_063701642.1 → XP_063557712.1  runt-related transcription factor 3 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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