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POU2F1 POU class 2 homeobox 1 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101045473, updated on 8-Mar-2024

Summary

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Gene symbol
POU2F1
Gene description
POU class 2 homeobox 1
See related
EnsemblRapid:ENSSBOG00000025169
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100939.1 (16289897..16477796)

NW_024100939.1Genomic Context describing neighboring genes Neighboring gene serine/threonine/tyrosine interacting like 2 Neighboring gene 40S ribosomal protein S17-like Neighboring gene CD247 molecule Neighboring gene aldo-keto reductase family 1 member D1-like Neighboring gene elongation factor 1-alpha 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100939 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
POU domain, class 2, transcription factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100939.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    16289897..16477796
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003928083.2 → XP_003928132.1  POU domain, class 2, transcription factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K6TC49, A0A2K6TC81
    Related
    ENSSBOP00000017245.2, ENSSBOT00000034055.2
    Conserved Domains (2) summary
    smart00352
    Location:303 → 377
    POU; Found in Pit-Oct-Unc transcription factors
    pfam00046
    Location:405 → 459
    Homeobox; Homeobox domain

  2. XM_003928086.2 → XP_003928135.1  POU domain, class 2, transcription factor 1 isoform X3

    UniProtKB/TrEMBL
    A0A2K6TC45, A0A2K6TC87
    Related
    ENSSBOP00000017210.1, ENSSBOT00000034019.2
    Conserved Domains (2) summary
    smart00352
    Location:240 → 314
    POU; Found in Pit-Oct-Unc transcription factors
    pfam00046
    Location:342 → 395
    Homeobox; Homeobox domain

  3. XM_003928085.3 → XP_003928134.1  POU domain, class 2, transcription factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K6TC81
    Related
    ENSSBOP00000017220.1, ENSSBOT00000034030.2
    Conserved Domains (2) summary
    smart00352
    Location:280 → 354
    POU; Found in Pit-Oct-Unc transcription factors
    pfam00046
    Location:382 → 436
    Homeobox; Homeobox domain

RNA

  1. XR_744882.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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