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IRF5 interferon regulatory factor 5 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100990704, updated on 8-Mar-2024

Summary

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Gene symbol
IRF5
Gene description
interferon regulatory factor 5
See related
Ensembl:ENSPPAG00000031382
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 6 NC_073255.2 (165742532..165754167)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 7 NC_073256.1 (17752862..17764413)

Chromosome 6 - NC_073255.2Genomic Context describing neighboring genes Neighboring gene kielin cysteine rich BMP regulator Neighboring gene filamin-C-like Neighboring gene transportin 3 Neighboring gene probable ribosome biogenesis protein RLP24 Neighboring gene ornithine decarboxylase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon regulatory factor 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073255.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    165742532..165754167
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063606091.1 → XP_063462161.1  interferon regulatory factor 5 isoform X1

  2. XM_034964956.3 → XP_034820847.2  interferon regulatory factor 5 isoform X1

  3. XM_034964960.3 → XP_034820851.2  interferon regulatory factor 5 isoform X2

  4. XM_008966046.4 → XP_008964294.2  interferon regulatory factor 5 isoform X1

  5. XM_057302684.1 → XP_057158667.1  interferon regulatory factor 5 isoform X2

  6. XM_063606092.1 → XP_063462162.1  interferon regulatory factor 5 isoform X2

  7. XM_034964957.3 → XP_034820848.2  interferon regulatory factor 5 isoform X1

Nucleotide Protein
Heading Accession and Version

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