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LOC100882069 zinc finger protein OZF-like [ Megachile rotundata (alfalfa leafcutting bee) ]

Gene ID: 100882069, updated on 22-Oct-2023

Summary

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Gene symbol
LOC100882069
Gene description
zinc finger protein OZF-like
See related
EnsemblRapid:LOC100882069
Gene type
protein coding
RefSeq status
MODEL
Organism
Megachile rotundata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Megachilidae; Megachilinae; Megachile
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current MROT_1.0 (GCF_000220905.1) Unplaced Scaffold NW_003797130.1 (350738..354376)

NW_003797130.1Genomic Context describing neighboring genes Neighboring gene probable E3 ubiquitin-protein ligase HERC4 Neighboring gene proline-rich protein 36-like Neighboring gene S-adenosylmethionine synthase Neighboring gene uncharacterized LOC105662044

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003797130.1 Unplaced Scaffold Reference MROT_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genes involved in convergent evolution of eusociality in bees. Woodard SH, et al. Proc Natl Acad Sci U S A, 2011 May 3. PMID 21482769, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein OZF-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megachile rotundata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MROT_1.0

Genomic

  1. NW_003797130.1 Reference MROT_1.0

    Range
    350738..354376
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003701747.2 → XP_003701795.1  zinc finger protein OZF-like

    Related
    XP_003701795.1, XM_003701747.2
    Conserved Domains (6) summary
    COG5048
    Location:236 → 431
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:295 → 315
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:384 → 401
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:349 → 371
    zf-C2H2; Zinc finger, C2H2 type
    pfam07776
    Location:22 → 93
    zf-AD; Zinc-finger associated domain (zf-AD)
    pfam13465
    Location:336 → 360
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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