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Alx1 ALX homeobox 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100759154, updated on 8-Mar-2024

Summary

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Gene symbol
Alx1
Gene description
ALX homeobox 1
Locus tag
I79_013911
See related
Ensembl:ENSCGRG00015008358
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614249.1 (722118..744210)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (168246471..168268160, complement)

NW_003614249.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 6 member 15 Neighboring gene leucine rich repeats and IQ motif containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryonic skeletal system morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ALX homeobox protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614249.1 Reference CriGri_1.0 Primary Assembly

    Range
    722118..744210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003506505.4 → XP_003506553.1  ALX homeobox protein 1

    UniProtKB/TrEMBL
    G3HSR7
    Conserved Domains (2) summary
    pfam00046
    Location:135 → 188
    Homeobox; Homeobox domain
    pfam03826
    Location:302 → 319
    OAR; OAR domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    168246471..168268160 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027394153.2 → XP_027249954.1  ALX homeobox protein 1

    UniProtKB/TrEMBL
    A0A8C2LWH4, G3HSR7
    Related
    ENSCGRP00015010977.1, ENSCGRT00015013462.2
Nucleotide Protein Strain
Heading Accession and Version

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