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AP1S1 adaptor related protein complex 1 subunit sigma 1 [ Canis lupus familiaris (dog) ]

Gene ID: 100688000, updated on 8-Mar-2024

Summary

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Official Symbol
AP1S1provided by VGNC
Official Full Name
adaptor related protein complex 1 subunit sigma 1provided by VGNC
Primary source
VGNC:VGNC:37956
See related
Ensembl:ENSCAFG00845000579
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (8524828..8530831, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (10402619..10408611, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (8620013..8626010, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (8484889..8490882, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (8455351..8461345, complement)

Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene N-acetyltransferase 16 (putative) Neighboring gene VGF nerve growth factor inducible Neighboring gene serpin family E member 1 Neighboring gene tripartite motif containing 56 Neighboring gene uncharacterized LOC106558874

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-1 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-1 complex subunit sigma-1A
Names
adaptor related protein complex 1 sigma 1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051810.1 Reference ROS_Cfam_1.0

    Range
    8524828..8530831 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038667996.1 → XP_038523924.1  AP-1 complex subunit sigma-1A

    UniProtKB/TrEMBL
    A0A8C0KLD8, A0A8C0P5V2, A0A8I3MGM6
    Related
    ENSCAFP00845000705.1, ENSCAFT00845000936.1
    Conserved Domains (1) summary
    cd14831
    Location:3 → 145
    AP1_sigma; AP-1 complex subunit sigma

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049266.1 Alternate UMICH_Zoey_3.1

    Range
    8484889..8490882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038477952.1 → XP_038333880.1  AP-1 complex subunit sigma-1A

    Conserved Domains (1) summary
    cd14831
    Location:3 → 145
    AP1_sigma; AP-1 complex subunit sigma

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

    Range
    8455351..8461345 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038603291.1 → XP_038459219.1  AP-1 complex subunit sigma-1A

    Conserved Domains (1) summary
    cd14831
    Location:3 → 145
    AP1_sigma; AP-1 complex subunit sigma

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

    Range
    8620013..8626010 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038539213.1 → XP_038395141.1  AP-1 complex subunit sigma-1A

    UniProtKB/TrEMBL
    A0A8C0KLD8, A0A8C0P5V2, A0A8I3MGM6
    Conserved Domains (1) summary
    cd14831
    Location:3 → 145
    AP1_sigma; AP-1 complex subunit sigma

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    10402619..10408611 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003434736.5 → XP_003434784.1  AP-1 complex subunit sigma-1A

    See identical proteins and their annotated locations for XP_003434784.1

    UniProtKB/TrEMBL
    A0A8C0KLD8, A0A8C0P5V2, A0A8I3MGM6
    Conserved Domains (1) summary
    cd14831
    Location:3 → 145
    AP1_sigma; AP-1 complex subunit sigma
Nucleotide Protein
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