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BEX3 brain expressed X-linked 3 [ Canis lupus familiaris (dog) ]

Gene ID: 100682628, updated on 8-Mar-2024

Summary

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Official Symbol
BEX3provided by VGNC
Official Full Name
brain expressed X-linked 3provided by VGNC
Primary source
VGNC:VGNC:54665
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
NGFRAP1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
3
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (78372511..78374275)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (62982628..62984392)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (77303618..77305382)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (75849837..75851601)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (77541679..77543443)

Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene transcription elongation factor A like 7 Neighboring gene transcription elongation factor A like 9 Neighboring gene BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like Neighboring gene uncharacterized LOC111094808

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein BEX3
Names
nerve growth factor receptor (TNFRSF16) associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051843.1 Reference ROS_Cfam_1.0

    Range
    78372511..78374275
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038450520.1 → XP_038306448.1  protein BEX3

    UniProtKB/TrEMBL
    A0A8C0K1I5, A0A8C0NTC6
    Conserved Domains (1) summary
    pfam04538
    Location:1 → 108
    BEX; Brain expressed X-linked like family

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049299.1 Alternate UMICH_Zoey_3.1

    Range
    75849837..75851601
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038523975.1 → XP_038379903.1  protein BEX3

    Conserved Domains (1) summary
    pfam04538
    Location:1 → 108
    BEX; Brain expressed X-linked like family

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

    Range
    77541679..77543443
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038652471.1 → XP_038508399.1  protein BEX3

    Conserved Domains (1) summary
    pfam04538
    Location:1 → 108
    BEX; Brain expressed X-linked like family

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

    Range
    77303618..77305382
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038587955.1 → XP_038443883.1  protein BEX3

    UniProtKB/TrEMBL
    A0A8C0K1I5, A0A8C0NTC6
    Conserved Domains (1) summary
    pfam04538
    Location:1 → 108
    BEX; Brain expressed X-linked like family

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    62982628..62984392
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003435627.5 → XP_003435675.1  protein BEX3

    See identical proteins and their annotated locations for XP_003435675.1

    UniProtKB/TrEMBL
    A0A8C0K1I5, A0A8C0NTC6
    Conserved Domains (1) summary
    pfam04538
    Location:1 → 108
    BEX; Brain expressed X-linked like family
Nucleotide Protein
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