U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ctcf CCCTC-binding factor [ Anolis carolinensis (green anole) ]

Gene ID: 100567348, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ctcf
Gene description
CCCTC-binding factor
See related
Ensembl:ENSACAG00000001050
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) Unplaced Scaffold NW_026943820.1 (18301848..18321127)
102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003338842.1 (965374..978168, complement)

NW_026943820.1Genomic Context describing neighboring genes Neighboring gene C-signal Neighboring gene C-signal Neighboring gene RHO family interacting cell polarization regulator 1 Neighboring gene capping protein regulator and myosin 1 linker 2 Neighboring gene uncharacterized LOC103280044 Neighboring gene par-6 family cell polarity regulator alpha

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcriptional repressor CTCF
Names
CCCTC-binding factor (zinc finger protein)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NW_026943820.1 Reference rAnoCar3.1.pri

    Range
    18301848..18321127
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062962021.1 → XP_062818091.1  transcriptional repressor CTCF

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Miscellaneous