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HSF2 heat shock transcription factor 2 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100438004, updated on 26-Mar-2024

Summary

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Gene symbol
HSF2
Gene description
heat shock transcription factor 2
Locus tag
CR201_G0036596
See related
Ensembl:ENSPPYG00000016976
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 5 NC_071990.2 (123785571..123819025)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 6 NC_071991.1 (123198371..123231836)

Chromosome 5 - NC_071990.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103890979 Neighboring gene uncharacterized LOC129060057 Neighboring gene U1 spliceosomal RNA Neighboring gene serine incorporator 1 Neighboring gene histone-lysine N-methyltransferase SETMAR-like Neighboring gene cAMP-dependent protein kinase inhibitor beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heat shock factor protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071990.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    123785571..123819025
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002817309.6 → XP_002817355.1  heat shock factor protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A2J8TAB8, A0A8I5TYI1
    Related
    ENSPPYP00000037723.1
    Conserved Domains (2) summary
    smart00415
    Location:6 → 110
    HSF; heat shock factor
    pfam06546
    Location:230 → 495
    Vert_HS_TF; Vertebrate heat shock transcription factor

  2. XM_002817308.6 → XP_002817354.1  heat shock factor protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8TAG9, A0A6D2WZG2, H2PK82
    Related
    ENSPPYP00000019006.2
    Conserved Domains (2) summary
    smart00415
    Location:6 → 110
    HSF; heat shock factor
    pfam06546
    Location:230 → 513
    Vert_HS_TF; Vertebrate heat shock transcription factor
Nucleotide Protein
Heading Accession and Version

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