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CD180 CD180 molecule [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100357587, updated on 8-Mar-2024

Summary

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Gene symbol
CD180
Gene description
CD180 molecule
See related
Ensembl:ENSOCUG00000015721
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See CD180 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 11 NC_067384.1 (6227255..6242917)

Chromosome 11 - NC_067384.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC103349641 Neighboring gene uncharacterized LOC103349642 Neighboring gene uncharacterized LOC103349639 Neighboring gene microtubule associated serine/threonine kinase family member 4 Neighboring gene E3 ubiquitin-protein ligase TRIM62

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067384.1 Chromosome 11 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CD180 antigen

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067384.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    6227255..6242917
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002714069.4 → XP_002714115.1  CD180 antigen

    UniProtKB/TrEMBL
    G1TA23
    Related
    ENSOCUP00000013503.2
    Conserved Domains (5) summary
    COG4886
    Location:146 → 329
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    cd00116
    Location:310 → 479
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:323 → 346
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:497 → 555
    LRR_8; Leucine rich repeat
    cl15307
    Location:577 → 626
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein
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