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PTPRA protein tyrosine phosphatase receptor type A [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100342875, updated on 3-Apr-2024

Summary

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Gene symbol
PTPRA
Gene description
protein tyrosine phosphatase receptor type A
See related
Ensembl:ENSOCUG00000021376
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 4 NC_067377.1 (17518889..17673445)

Chromosome 4 - NC_067377.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 239 Neighboring gene PC-esterase domain containing 1A Neighboring gene VPS16 core subunit of CORVET and HOPS complexes Neighboring gene mitochondrial ribosomal protein S26 Neighboring gene oxytocin/neurophysin I prepropeptide

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067377.1 Chromosome 4 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-type tyrosine-protein phosphatase alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067377.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    17518889..17673445
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051845204.1 → XP_051701164.1  receptor-type tyrosine-protein phosphatase alpha isoform X1

  2. XM_051845206.1 → XP_051701166.1  receptor-type tyrosine-protein phosphatase alpha isoform X3

  3. XM_008256241.3 → XP_008254463.1  receptor-type tyrosine-protein phosphatase alpha isoform X4

    UniProtKB/TrEMBL
    A0A5F9CAD3, G1TXJ3
    Related
    ENSOCUP00000021795.3
    Conserved Domains (3) summary
    PHA03255
    Location:32 → 188
    PHA03255; BDLF3; Provisional
    smart00194
    Location:254 → 514
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:574 → 804
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  4. XM_051845207.1 → XP_051701167.1  receptor-type tyrosine-protein phosphatase alpha isoform X5

  5. XM_051845205.1 → XP_051701165.1  receptor-type tyrosine-protein phosphatase alpha isoform X2

  6. XM_017341731.2 → XP_017197220.1  receptor-type tyrosine-protein phosphatase alpha isoform X6

    UniProtKB/TrEMBL
    A0A5F9CAD3
    Related
    ENSOCUP00000041838.1

  7. XM_051845208.1 → XP_051701168.1  receptor-type tyrosine-protein phosphatase alpha isoform X7

Nucleotide Protein
Heading Accession and Version

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