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TGM4 transglutaminase 4 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100189556, updated on 26-Mar-2024

Summary

Gene symbol
TGM4
Gene description
transglutaminase 4
Locus tag
CR201_G0006273
See related
Ensembl:ENSPPYG00000013951
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
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Genomic context

Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 2 NC_085928.1 (109571139..109610869, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 3 NC_071988.1 (97345753..97385009, complement)

Chromosome 2 - NC_085928.1Genomic Context describing neighboring genes Neighboring gene exosome component 7 Neighboring gene zinc finger DHHC-type palmitoyltransferase 3 Neighboring gene peptidyl-prolyl cis-trans isomerase A-like Neighboring gene transmembrane protein 42 Neighboring gene kinesin family member 15

Genomic regions, transcripts, and products

General protein information

Preferred Names
protein-glutamine gamma-glutamyltransferase 4
Names
prostate-specific transglutaminase 4
transglutaminase 4 (prostate)
NP_001128592.1
XP_054406464.2
XP_054406465.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001135120.1NP_001128592.1  protein-glutamine gamma-glutamyltransferase 4

    See identical proteins and their annotated locations for NP_001128592.1

    Status: PROVISIONAL

    Source sequence(s)
    EU685250
    UniProtKB/TrEMBL
    A0A2J8WXE9, B4YUQ9, H2PAZ5
    Related
    ENSPPYP00000015603.2, ENSPPYT00000016224.2
    Conserved Domains (4) summary
    smart00460
    Location:263353
    TGc; Transglutaminase/protease-like homologues
    COG1305
    Location:266353
    YebA; Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]
    pfam00868
    Location:9122
    Transglut_N; Transglutaminase family
    pfam00927
    Location:587684
    Transglut_C; Transglutaminase family, C-terminal ig like domain

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_085928.1 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    109571139..109610869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054550489.2XP_054406464.2  protein-glutamine gamma-glutamyltransferase 4 isoform X1

  2. XM_054550490.2XP_054406465.2  protein-glutamine gamma-glutamyltransferase 4 isoform X2