U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

dclk1b doublecortin-like kinase 1b [ Danio rerio (zebrafish) ]

Gene ID: 100151759, updated on 27-Mar-2024

Summary

Official Symbol
dclk1bprovided by ZNC
Official Full Name
doublecortin-like kinase 1bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-080516-7
See related
Ensembl:ENSDARG00000104664 AllianceGenome:ZFIN:ZDB-GENE-080516-7
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
dckl1b; wu:fc23h02; zgc:171845
Summary
Predicted to enable ATP binding activity and protein kinase activity. Predicted to act upstream of or within intracellular signal transduction and protein phosphorylation. Orthologous to human DCLK1 (doublecortin like kinase 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (32867420..32875106)
105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (33009441..33017127)

Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene periostin, osteoblast specific factor b Neighboring gene spartin b Neighboring gene neurobeachin b Neighboring gene mab-21-like 1 Neighboring gene uncharacterized LOC110437911

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
serine/threonine-protein kinase DCLK1b

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001127474.1NP_001120946.1  serine/threonine-protein kinase DCLK1b

    See identical proteins and their annotated locations for NP_001120946.1

    Status: PROVISIONAL

    Source sequence(s)
    BC161620
    UniProtKB/TrEMBL
    B1WB53
    Related
    ENSDARP00000138244.1, ENSDART00000159442.2
    Conserved Domains (1) summary
    cl21453
    Location:90176
    PKc_like; Protein Kinases, catalytic domain

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007126.7 Reference GRCz11 Primary Assembly

    Range
    32867420..32875106
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)