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slc26a6 LOC100005108 [ Danio rerio (zebrafish) ]

Gene ID: 100005108, updated on 27-Mar-2024

Summary

Gene symbol
slc26a6
Gene description
LOC100005108
See related
Ensembl:ENSDARG00000055835
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
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Genomic context

Location:
chromosome: 8
Exon count:
19
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (26267563..26289662)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (26248475..26269131)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene solute carrier family 26 member 6-like Neighboring gene solute carrier family 26 member 6 Neighboring gene monoglyceride lipase Neighboring gene protein kinase, cAMP-dependent, regulatory, type II, alpha A

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
solute carrier family 26 member 6
Names
slc26a6b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001423271.1NP_001410200.1  solute carrier family 26 member 6

    Status: VALIDATED

    Source sequence(s)
    CR847503
    UniProtKB/TrEMBL
    A0A8M1Q7V1, A9C3T3

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    26267563..26289662
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001344207.7XP_001344243.4  solute carrier family 26 member 6

    UniProtKB/TrEMBL
    A9C3T3
    Related
    ENSDARP00000123668.2, ENSDART00000138882.3
    Conserved Domains (2) summary
    cd07042
    Location:655725
    STAS_SulP_like_sulfate_transporter; Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function
    TIGR00815
    Location:63729
    sulP; high affinity sulphate transporter 1