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    Fbll1 fibrillarin-like 1 [ Mus musculus (house mouse) ]

    Gene ID: 237730, updated on 11-Apr-2024

    Summary

    Official Symbol
    Fbll1provided by MGI
    Official Full Name
    fibrillarin-like 1provided by MGI
    Primary source
    MGI:MGI:3034689
    See related
    Ensembl:ENSMUSG00000051062 AllianceGenome:MGI:3034689
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to enable RNA binding activity; histone-glutamine methyltransferase activity; and rRNA methyltransferase activity. Acts upstream of or within blastocyst hatching. Predicted to be located in fibrillar center and nucleoplasm. Predicted to be part of box C/D RNP complex and small-subunit processome. Predicted to be active in Cajal body and nucleolus. Is expressed in early conceptus. Orthologous to human FBLL1 (fibrillarin like 1). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    NEW
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    Genomic context

    Location:
    11 A4; 11 21.96 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (35688207..35689711, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (35797380..35798884, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene slit guidance ligand 3 Neighboring gene predicted gene, 46278 Neighboring gene STARR-positive B cell enhancer ABC_E1137 Neighboring gene microRNA 103-1 Neighboring gene STARR-positive B cell enhancer ABC_E9361 Neighboring gene STARR-positive B cell enhancer ABC_E6965 Neighboring gene pantothenate kinase 3 Neighboring gene arginyl-tRNA synthetase 1 Neighboring gene WW, C2 and coiled-coil domain containing 1 Neighboring gene STARR-seq mESC enhancer starr_29194

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC62475

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables histone H2AQ104 methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables rRNA methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within blastocyst hatching IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in box C/D sno(s)RNA 3'-end processing IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within methylation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in rRNA methylation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within rRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in Cajal body IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of box C/D methylation guide snoRNP complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in fibrillar center ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of small-subunit processome IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1
    Names
    protein-glutamine methyltransferase
    NP_001004147.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001004147.3NP_001004147.1  rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1

      See identical proteins and their annotated locations for NP_001004147.1

      Status: VALIDATED

      Source sequence(s)
      BC052068, BE648485, BU701095
      Consensus CDS
      CCDS36128.1
      UniProtKB/Swiss-Prot
      Q80WS3
      Related
      ENSMUSP00000128889.2, ENSMUST00000160726.4
      Conserved Domains (1) summary
      PTZ00146
      Location:73314
      PTZ00146; fibrillarin; Provisional

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      35688207..35689711 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)