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    TVP23C trans-golgi network vesicle protein 23 homolog C [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100174506, updated on 26-Mar-2024

    Summary

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    Gene symbol
    TVP23C
    Gene description
    trans-golgi network vesicle protein 23 homolog C
    Locus tag
    CR201_G0035246
    See related
    Ensembl:ENSPPYG00000008005
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Also known as
    FAM18B; TVP23B; FAM18B1
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 19
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 19 NC_072004.2 (15550960..15577496, complement)
    RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 17 NC_072002.1 (15540899..15567229, complement)

    Chromosome 19 - NC_072004.2Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein uL6-like Neighboring gene CMT1A duplicated region transcript 4 Neighboring gene peptidyl-prolyl cis-trans isomerase A-like Neighboring gene uncharacterized LOC129051208 Neighboring gene F-box and WD repeat domain containing 10B Neighboring gene tripartite motif containing 16

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • DKFZp468J0625

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Golgi apparatus membrane protein TVP23 homolog B
    Names
    Protein FAM18B
    family with sequence similarity 18, member B
    family with sequence similarity 18, member B1
    protein FAM18B1
    trans-golgi network vesicle protein 23 homolog B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001133963.1 → NP_001127435.1  Golgi apparatus membrane protein TVP23 homolog B

      See identical proteins and their annotated locations for NP_001127435.1

      Status: PROVISIONAL

      Source sequence(s)
      CR859404
      UniProtKB/Swiss-Prot
      Q5R9I4
      UniProtKB/TrEMBL
      A0A2J8TFB8, H2NST6
      Related
      ENSPPYP00000031530.1, ENSPPYT00000041624.1
      Conserved Domains (1) summary
      pfam05832
      Location:32 → 174
      DUF846; Eukaryotic protein of unknown function (DUF846)

    RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Genomic

    1. NC_072004.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

      Range
      15550960..15577496 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024234286.3 → XP_024090054.1  Golgi apparatus membrane protein TVP23 homolog B isoform X2

      UniProtKB/TrEMBL
      H2NST6
      Conserved Domains (1) summary
      pfam05832
      Location:32 → 206
      DUF846; Eukaryotic protein of unknown function (DUF846)

    2. XM_063717931.1 → XP_063574001.1  Golgi apparatus membrane protein TVP23 homolog B isoform X3

    3. XM_054535282.2 → XP_054391257.1  Golgi apparatus membrane protein TVP23 homolog B isoform X4

    4. XM_063717930.1 → XP_063574000.1  Golgi apparatus membrane protein TVP23 homolog B isoform X1

    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5R9I4.1 GenPept UniProtKB/Swiss-Prot:Q5R9I4

    Gene LinkOut

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