1: RB1CC1 RB1-inducible coiled-coil 1 [ Homo sapiens ]

GeneID: 9821 updated 3-Dec-2009

[Top][Help]Summary

Official Symbol
RB1CC1provided by HGNC
Official Full Name
RB1-inducible coiled-coil 1provided by HGNC
Primary Source
HGNC:15574
See related
Ensembl:ENSG00000023287; HPRD:06019; MIM:606837
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CC1; FIP200; RB1CC1
Summary
The protein encoded by this gene interacts with signaling pathways to coordinately regulate cell growth, cell proliferation, apoptosis, autophagy, and cell migration. This tumor suppressor also enhances retinoblastoma 1 gene expression in cancer cells. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq]

[Top][Help]Genomic regions, transcripts, and products

(minus strand) Go to reference sequence detailsTry our new Sequence Viewer


[Top][Help]Genomic context

chromosome: 8; Location: 8q11See RB1CC1 in MapViewer

[Top][Help]Bibliography

Related Articles in PubMed

GeneRIFs: Gene References Into Function What's a GeneRIF?

PubMed 1. Studies elucidated the inhibitory mechanism in which mTORC1 phosphorylates the autophagy regulatory complex containing unc-51-like kinase 1 (ULK1), the mammalian Atg13 protein, and focal adhesion kinase interacting protein of 200 kD (FIP200).
PubMed 2. Nuclear RB1CC1 directly activates the RB1 promoter to enhance RB1 expression associated with breast cancer.
PubMed 3. The ULK-Atg13-FIP200 complexes are direct targets of mTOR and important regulators of autophagy in response to mTOR signaling.
PubMed 4. ATG13 and ULK1 are phosphorylated by the mTOR pathway in a nutrient starvation-regulated manner, indicating that the ULK1.ATG13.FIP200 complex acts as a node for integrating incoming autophagy signals into autophagosome biogenesis.
PubMed 5. Nuclear RB1CC1 directly activates the RB1 promoter to enhance RB1 expression in cancer cells.
PubMed 6. Observational study of gene-disease association. (HuGE Navigator)
PubMed 7. These results suggest that FIP200 is a novel mammalian autophagy factor that functions together with ULKs.
PubMed 8. Cellular functions of FIP200 and its interacting proteins, and the emerging roles of FIP200 in embryogenesis and cancer development. Review.
PubMed 9. provide the first evidence for the existence of a close-spatially controlled-mode of regulation of FIP200 and PIASy nucleocytoplasmic functions
PubMed 10. RB1CC1 insufficiency causes neuronal atrophy through mTOR signaling alteration and involved in the pathology of Alzheimer's diseases.
PubMed 11. RB1CC1 and PACE4 genes might be the DNA targets of sodium arsenite treatment in human lymphoblastoid cells.
PubMed 12. RB1CC1 gene preferentially expressed and contributed to the maturation of human embryonic musculoskeletal cells, and may regulate the proliferative activity and maturation of tumor cells derived from these tissues.
PubMed 13. RB1CC1 induces the expression of RB1, especially of underphosphorylated forms, then suppresses cell cycle progression in human neoplastic cells
PubMed 14. FIP200 regulates of cell size by interaction with the TSC1-TSC2 complex.
PubMed 15. RB1CC1 is frequently mutated in breast cancer and shows characteristics of a classical tumor-suppressor gene.
PubMed 16. expression and promoter activities of RB1CC1 in developing murine and human tissues; RB1CC1 expression is controlled more stringently by modification at intron 1 in humans than in mice
PubMed 17. FIP200 increases p21 protein levels via stabilization of its upstream regulator p53 and decreases cyclin D1 protein. Both effects are critical for FIP200-induced G1 arrest and may contribute to the antitumor activities of FIP200 in breast cancer.
PubMed 18. Rb1cc1 expression is a prerequisite for the induction of RB1 and myosin heavy chain. Rb1cc1 plays a crucial role in muscular differentiation and function.

[Top][Help]Interactions

Description ..........
  Product Interactant Other Gene Complex Source Pubs          
 
  RB1 inducible coiled coil 1   NP_005598.3   PTK2      HPRD    PubMed
Affinity Capture-MS
  BioGRID:115160   BioGRID:116725   CDC2L6      BioGRID    PubMed
Affinity Capture-MS
  BioGRID:115160   BioGRID:118809   DBNL      BioGRID    PubMed
Affinity Capture-MS
  BioGRID:115160   BioGRID:120176   ERCC6L      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:115160   BioGRID:110381   MAP3K5      BioGRID    PubMed
Affinity Capture-MS
  BioGRID:115160   BioGRID:117369   MOBKL3      BioGRID    PubMed
Affinity Capture-Western; Reconstituted Complex
  BioGRID:115160   BioGRID:111719   PTK2      BioGRID    PubMed
Affinity Capture-Western; Phenotypic Suppression; Reconstituted Complex; Two-hybrid
  BioGRID:115160   BioGRID:108480   PTK2B      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:115160   BioGRID:113038   TRAF2      BioGRID    PubMed

[Top][Help]General gene information

Markers

RH25416(e-PCR)
Links: UniSTS:79619
D8S1068(e-PCR)
Links: UniSTS:36133
A007F24(e-PCR)
Links: UniSTS:64572
RH78347(e-PCR)
Links: UniSTS:76864
WI-13801(e-PCR)
Links: UniSTS:32585
G59745(e-PCR)
Links: UniSTS:137041
RH12077(e-PCR)
Links: UniSTS:66917
D8S1669(e-PCR)
Links: UniSTS:74091
WI-12431(e-PCR)
Links: UniSTS:2938
D8S2116(e-PCR)
Links: UniSTS:22175
G20788(e-PCR)
Links: UniSTS:7329
A006G21(e-PCR)
Links: UniSTS:7330
WI-15400(e-PCR)
Links: UniSTS:41408
D8S1215(e-PCR)
Links: UniSTS:150247
WI-19524(e-PCR)
Links: UniSTS:74989
A007F23(e-PCR)
Links: UniSTS:19199

Phenotypes

Breast cancer, somatic
MIM: 114480

Homology

Homologs of the RB1CC1 gene The RB1CC1 gene is conserved in chimpanzee, dog, cow, mouse, rat, chicken, fruit fly, and mosquito.


Map Viewer (Mouse, Rat)

Gene Ontology Provided by GOA

Function Evidence
protein binding IPI PubMed
Component Evidence
ULK1-ATG13-FIP200 complex IPI PubMed
cytoplasm IEA   
cytosol IEA   
nucleus IEA   
pre-autophagosomal structure IEA   

[Top][Help]General protein information

Preferred Names
Rb1-inducible coiled coil protein 1
Names
Rb1-inducible coiled coil protein 1
200 kDa FAK family kinase-interacting protein

[Top][Help]NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

Genomic

  1. NG_015833.1 RefSeqGene

    Range
    5000..97008
    Download
    GenBank FASTA Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001083617.1NP_001077086.1  Rb1-inducible coiled coil protein 1 isoform 2

    Description
    Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 3' coding region, compared to variant 1, resulting in a shorter protein (isoform 2).
    Source sequence(s)
    AB059622,AC090814,AC113139,D86958,DA326842
    Consensus CDS
    CCDS47856.1
    UniProtKB/Swiss-Prot
    Q8TDY2
    Related Ensembl
    ENSP00000396067, ENST00000435644
    Conserved Domains (2) summary
    pfam10377
    Location:14691587
    Blast Score: 256
    ATG11; Autophagy-related protein 11
    PRK00409
    Location:11231235
    Blast Score: 138
    PRK00409; recombination and DNA strand exchange inhibitor protein; Reviewed
  2. NM_014781.4NP_055596.3  Rb1-inducible coiled coil protein 1 isoform 1

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
    Source sequence(s)
    AB059622,AC090814,AC113139,BC017556,DA326842
    Consensus CDS
    CCDS34892.1
    UniProtKB/Swiss-Prot
    Q8TDY2
    Related Ensembl
    ENSP00000025008, ENST00000025008
    Conserved Domains (2) summary
    pfam10377
    Location:14691590
    Blast Score: 254
    ATG11; Autophagy-related protein 11
    PRK00409
    Location:11231235
    Blast Score: 138
    PRK00409; recombination and DNA strand exchange inhibitor protein; Reviewed

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Genome Reference Consortium Human Build 37 (GRCh37), Primary_Assembly

Genomic

  1. NC_000008.10

    Range
    53535017..53627025, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NT_008183.19 

    Range
    5399418..5491426, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (Celera)

Genomic

  1. AC_000051.1

    Range
    49525377..49617589, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_923929.1 

    Range
    6658442..6750654, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (HuRef)

Genomic

  1. AC_000140.1

    Range
    49002570..49094644, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_001839132.1 

    Range
    5401338..5493412, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

[Top][Help]Related Sequences

  Nucleotide   Protein
  genomic   AC090814.2  (121737..142937)   None
  genomic   AC113139.2  (96705..167478)   None
  genomic   CH471068.1   EAW86719.1
       EAW86720.1
       EAW86721.1
  mRNA   AB059622.1   BAB69690.1
  mRNA   AK291699.1   BAF84388.1
  mRNA   AK294579.1   BAG57770.1
  mRNA   AK307436.1   None
  mRNA   AY173931.1   AAO17545.1
  mRNA   BC017556.1   AAH17556.1
  mRNA   BC032074.1   None
  mRNA   D86958.1   BAA13194.2
  mRNA   DA326842.1   None
  mRNA   Z35085.1   None
  other-genetic   DQ892402.2   ABM83328.1
Protein Accession   Links
Q86YR4   GenPept   UniProtKB/TrEMBL:Q86YR4
Q8TDY2.3   GenPept   UniProtKB/Swiss-Prot:Q8TDY2

[Top][Help]Additional Links

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.