Official Symbol

ZMYM5provided by HGNC

Official Full Name

zinc finger, MYM-type 5provided by HGNC

Primary Source

HGNC:13029

Locus Tag

RP11-61K9.1

See related

Ensembl:ENSG00000132950

Gene type

protein coding

RefSeq status

VALIDATED

Organism

Homo sapiens

Lineage

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo

Also known as

MYM; ZNF237; HSPC050; ZNF198L1; ZMYM5

(minus strand) Go to reference sequence detailsTry our new Sequence Viewer

chromosome: 13; Location: 13q12See ZMYM5 in MapViewer

Preferred Names

zinc finger protein 237

Names

zinc finger protein 237

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001039649.2 → NP_001034738.1  zinc finger protein 237 isoform 2

   Description

   Transcript Variant: This variant (2) differs in the 3' UTR and has multiple differences in the 3' coding region, compared to variant 3. These differences result in a protein (isoform 2) with a shorter and distinct C-terminus, compared to isoform 3.

   Source sequence(s)

   AJ133353,AL355001,BC007048

   Consensus CDS

   CCDS31943.1

   UniProtKB/Swiss-Prot

   Q9UJ78

   Related Ensembl

   ENSP00000372364, ENST00000382907

2. NM_001039650.2 → NP_001034739.1  zinc finger protein 237 isoform 1

   Description

   Transcript Variant: This variant (1) differs in the 3' UTR and has multiple differences in the 3' coding region, compared to variant 3. These differences result in a protein (isoform 1) with a shorter and distinct C-terminus, compared to isoform 3.

   Source sequence(s)

   AJ133352,AL355001,BC007048

   Consensus CDS

   CCDS31942.1

   UniProtKB/Swiss-Prot

   Q9UJ78

   Related Ensembl

   ENSP00000372361, ENST00000382905

   Conserved Domains (1) summary

   pfam06467
   Location:241 – 276
   Blast Score: 119

   zf-FCS; MYM-type Zinc finger with FCS sequence motif

3. NM_001142684.1 → NP_001136156.1  zinc finger protein 237 isoform 3

   Description

   Transcript Variant: This variant (3) represents the longest transcript and encodes the longest isoform (3).

   Source sequence(s)

   AJ133352,AL354808,AL355001,BU853478

   Consensus CDS

   CCDS45015.1

   UniProtKB/Swiss-Prot

   Q9UJ78

   Related Ensembl

   ENSP00000337034, ENST00000337963

   Conserved Domains (2) summary

   pfam06467
   Location:372 – 415
   Blast Score: 120

   zf-FCS; MYM-type Zinc finger with FCS sequence motif

   smart00597
   Location:563 – 638
   Blast Score: 113

   ZnF_TTF; zinc finger in transposases and transcription factors

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Genome Reference Consortium Human Build 37 (GRCh37), Primary_Assembly

Genomic

1. NC_000013.10

   Range

   20397623..20437775, complement

   Download

   GenBank FASTA Sequence Viewer (Graphics)

2. NT_024524.14 

   Range

   1377623..1417775, complement

   Download

   GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (Celera)

Genomic

1. AC_000056.1

   Range

   1459412..1499563, complement

   Download

   GenBank FASTA Sequence Viewer (Graphics)

2. NW_925473.1 

   Range

   1194636..1234787, complement

   Download

   GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (HuRef)

Genomic

1. AC_000145.1

   Range

   1202817..1243158, complement

   Download

   GenBank FASTA Sequence Viewer (Graphics)

2. NW_001838069.1 

   Range

   1202817..1243158, complement

   Download

   GenBank FASTA Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

These RefSeqs were suppressed for the cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related sequence links, or BLAST links (BLink), but may still be retrieved by clicking on their accession.version below.

 

1. NM_014242.1: Suppressed sequence

   Description

   NM_014242.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.

Nucleotide		Protein
genomic	AL354808.24  (158386..169302)	None
genomic	AL355001.20	CAI16180.1
		CAI16181.1
genomic	CH471075.1	EAX08235.1
		EAX08236.1
		EAX08237.1
		EAX08238.1
		EAX08239.1
		EAX08240.1
		EAX08241.1
mRNA	AF161535.1	AAF29022.1
mRNA	AJ133352.1	CAB57262.1
mRNA	AJ133353.1	CAB57263.1
mRNA	AJ133354.1	CAB57264.1
mRNA	AJ133355.1	CAB57265.1
mRNA	AK312724.1	BAG35598.1
mRNA	BC007048.1	AAH07048.1
mRNA	BI561630.1	None
mRNA	BT006687.1	AAP35333.1
mRNA	BU853478.1	None
mRNA	BX647750.1	None

Protein Accession	Links
Q9UJ78.4	GenPept	UniProtKB/Swiss-Prot:Q9UJ78