1: Zfhx4 zinc finger homeodomain 4 [ Mus musculus ]

GeneID: 80892 updated 3-Dec-2009

[Top][Help]Summary

Official Symbol
Zfhx4provided by MGI
Official Full Name
zinc finger homeodomain 4provided by MGI
Primary Source
MGI:2137668
See related
Ensembl:ENSMUSG00000025255
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus
Also known as
Zfh4; Zfh-4; A930021B15; C130041O22Rik; Zfhx4

[Top][Help]Genomic regions, transcripts, and products

(plus) Go to reference sequence detailsTry our new Sequence Viewer


[Top][Help]Genomic context

chromosome: 3; Location: 3 A1See Zfhx4 in MapViewer

[Top][Help]Bibliography

Related Articles in PubMed

[Top][Help]General gene information

Markers

D3Mit150(e-PCR), detects polymorphism
Links: UniSTS:129562
19.MMHAP53FLG1.seq(e-PCR)
Links: UniSTS:123432
AI007855(e-PCR)
Links: UniSTS:261678
C130041O22Rik(e-PCR), detects polymorphism
Links: UniSTS:265051

Homology

Homologs of the Zfhx4 gene The Zfhx4 gene is conserved in human, dog, cow, rat, chicken, and zebrafish.


Map Viewer (Human, Rat)

Gene Ontology Provided by GOA

Component Evidence
cellular_component ND   
intracellular IEA   
nucleus IEA   

[Top][Help]General protein information

Preferred Names
zinc finger homeodomain 4
Names
zinc finger homeodomain 4

[Top][Help]NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

mRNA and Protein(s)

  1. NM_030708.2NP_109633.2  zinc finger homeodomain 4

    Source sequence(s)
    AC115031,AC118246,BC061199,BI988177
    Consensus CDS
    CCDS38382.1
    UniProtKB/TrEMBL
    Q6P8L4
    Related Ensembl
    ENSMUSP00000026284, ENSMUST00000026284
    Conserved Domains (2) summary
    cd00086
    Location:21982255
    Blast Score: 179
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    COG5576
    Location:25472669
    Blast Score: 124
    COG5576; Homeodomain-containing transcription factor [Transcription]

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly (C57BL/6J)

Genomic

  1. NC_000069.5

    Range
    5218553..5415854
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NT_078380.6 

    Range
    2218553..2415854
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (based on Celera)

Genomic

  1. AC_000025.1

    Range
    5302819..5500316
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_001030717.1 

    Range
    2302819..2500316
    Download
    GenBank FASTA Sequence Viewer (Graphics)

[Top][Help]Related Sequences

  Nucleotide   Protein Strain
  genomic   AC115031.11  (64515..170459)   None
  genomic   AC118246.15  (10344..77238)   None
  genomic   CH466577.2   EDL05218.1   mixed
  mRNA   AB024499.1   BAB03600.1   Swiss Webster/NIH
  mRNA   AK044540.1   BAC31970.1   C57BL/6J
  mRNA   AK081561.1   BAC38260.1   C57BL/6J
  mRNA   AK084213.1   None   C57BL/6J
  mRNA   AK086581.1   None   C57BL/6J
  mRNA   BC061199.1   AAH61199.1
  mRNA   BI988177.1   None
  mRNA   L36173.1   None
Protein Accession   Links
Q6P8L4   GenPept   UniProtKB/TrEMBL:Q6P8L4
Q8C4P4   GenPept   UniProtKB/TrEMBL:Q8C4P4
Q8C8T0   GenPept   UniProtKB/TrEMBL:Q8C8T0
Q9JJN2.1   GenPept   UniProtKB/Swiss-Prot:Q9JJN2

[Top][Help]Additional Links

Gene LinkOut

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