1: ZDHHC11 zinc finger, DHHC-type containing 11 [ Homo sapiens ]

GeneID: 79844 updated 3-Dec-2009

[Top][Help]Summary

Official Symbol
ZDHHC11provided by HGNC
Official Full Name
zinc finger, DHHC-type containing 11provided by HGNC
Primary Source
HGNC:19158
Locus Tag
UNQ598
See related
Ensembl:ENSG00000188818; HPRD:15708
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ZNF399; FLJ13153; ZDHHC11

[Top][Help]Genomic regions, transcripts, and products

(minus strand) Go to reference sequence detailsTry our new Sequence Viewer


[Top][Help]Genomic context

chromosome: 5; Location: 5p15.33See ZDHHC11 in MapViewer

[Top][Help]Bibliography

Related Articles in PubMed

GeneRIFs: Gene References Into Function What's a GeneRIF?

PubMed 1. data suggest that gain of 5p15.33 (TPPP and ZDHHC11) may become a potential biomarker identifying high-risk patients with disease progression in bladder cancer.

[Top][Help]General gene information

Markers

D5S2254E(e-PCR)
Links: UniSTS:154460
A008P27(e-PCR)
Links: UniSTS:55169
RH91350(e-PCR)
Links: UniSTS:92054

Homology

Homologs of the ZDHHC11 gene The ZDHHC11 gene is conserved in chimpanzee, cow, mouse, and rat.

Gene Ontology Provided by GOA

Function Evidence
acyltransferase activity IEA   
metal ion binding IEA   
transferase activity IEA   
zinc ion binding IEA   
Component Evidence
integral to membrane IEA   
membrane IEA   

[Top][Help]General protein information

Preferred Names
zinc finger, DHHC-type containing 11
Names
zinc finger, DHHC-type containing 11
zinc finger, DHHC domain containing 11
NP_079062.1
5` partial

[Top][Help]NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

mRNA and Protein(s)

  1. NM_024786.2NP_079062.1  zinc finger, DHHC-type containing 11

    Source sequence(s)
    AK023215,AK024233,BC032000
    Consensus CDS
    CCDS3857.1
    UniProtKB/Swiss-Prot
    Q9H8X9
    Related Ensembl
    ENSP00000283441, ENSP00000397719, ENST00000283441, ENST00000424784
    Conserved Domains (2) summary
    COG5273
    Location:38192
    Blast Score: 211
    COG5273; Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]
    pfam01529
    Location:116178
    Blast Score: 204
    zf-DHHC; DHHC zinc finger domain

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Genome Reference Consortium Human Build 37 (GRCh37), Primary_Assembly

Genomic

  1. NC_000005.9

    Range
    795719..851100, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NT_006576.16 

    Range
    785719..841100, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (Celera)

Genomic

  1. AC_000048.1

    Range
    4576..11090
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_921480.1 

    Range
    5323..8795
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  3. NW_922485.1 

    Range
    4576..11090
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (HuRef)

Genomic

  1. AC_000137.1

    Range
    779880..833985
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_001838923.2 

    Range
    1288985..1343090
    Download
    GenBank FASTA Sequence Viewer (Graphics)

[Top][Help]Related Sequences

  Nucleotide   Protein
  genomic   AC010427.5  (43330..68882)   None
  genomic   AC026740.6  (185779..201463)   None
  genomic   AC122719.2  (20148..34289)   None
  genomic   CH471304.1   EAW52307.1
  mRNA   AF267859.1   AAG44728.1
  mRNA   AK023215.1   BAB14468.1
  mRNA   AK024233.1   None
  mRNA   AY358673.1   AAQ89036.1
  mRNA   BC032000.1   AAH32000.1
  mRNA   CR605165.1   None
Protein Accession   Links
Q6UWR9   GenPept   UniProtKB/TrEMBL:Q6UWR9
Q9H2I9   GenPept   UniProtKB/TrEMBL:Q9H2I9
Q9H8X9.1   GenPept   UniProtKB/Swiss-Prot:Q9H8X9

[Top][Help]Additional Links

Gene LinkOut

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