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1: ZNF174 zinc finger protein 174 [ Homo sapiens ]

GeneID: 7727 updated 3-Dec-2009

[Top][Help]Summary

Official Symbol
ZNF174provided by HGNC
Official Full Name
zinc finger protein 174provided by HGNC
Primary Source
HGNC:12963
See related
Ensembl:ENSG00000103343; HPRD:04876; MIM:603900
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ZSCAN8; ZNF174

[Top][Help]Genomic regions, transcripts, and products

(plus) Go to reference sequence detailsTry our new Sequence Viewer


[Top][Help]Genomic context

chromosome: 16; Location: 16p13.3See ZNF174 in MapViewer

[Top][Help]Bibliography

Related Articles in PubMed

GeneRIFs: Gene References Into Function What's a GeneRIF?

PubMed 1. Both size exclusion chromatography and equilibrium sedimentation analysis demonstrate that the ZNF174 SCAN domain forms a homodimer
Submit: New GeneRIF Correction

[Top][Help]Interactions

Description ..........
  Product Interactant Other Gene Complex Source Pubs          
 
  NP_003441.1   NP_003441.1   ZNF174      HPRD    PubMed
 
  NP_003441.1   NP_066966.1   ZNF20      HPRD    PubMed
 
  NP_003441.1   NP_008896.1   ZNF24      HPRD    PubMed
Reconstituted Complex; Two-hybrid
  BioGRID:113516   BioGRID:113516   ZNF174      BioGRID    PubMed
Two-hybrid
  BioGRID:113516   BioGRID:113529   ZNF192      BioGRID    PubMed
Two-hybrid
  BioGRID:113516   BioGRID:113403   ZNF24      BioGRID    PubMed

[Top][Help]General gene information

Markers

RH91708(e-PCR)
Links: UniSTS:92722
RH70598(e-PCR)
Links: UniSTS:28276
STS-U31248(e-PCR)
Links: UniSTS:30862
D16S2636(e-PCR)
Links: UniSTS:42437
D16S3379(e-PCR)
Links: UniSTS:474319

Homology

Homologs of the ZNF174 gene The ZNF174 gene is conserved in chimpanzee, dog, cow, mouse, and rat.


Map Viewer (Mouse, Rat)

[Top][Help]General protein information

Preferred Names
zinc finger protein 174
Names
zinc finger protein 174

[Top][Help]NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

mRNA and Protein(s)

  1. NM_001032292.2 → NP_001027463.1  zinc finger protein 174 isoform b

    Description
    Transcript Variant: This variant (2) contains an alternative 3' terminal exon compared to transcript variant 1, resulting in a shorter isoform (b) with a different C-terminus compared to isoform a.
    Source sequence(s)
    BC001161,BI918471,CR590935,DA962432
    Consensus CDS
    CCDS32380.1
    UniProtKB/Swiss-Prot
    Q15697
    Related Ensembl
    ENSP00000339781, ENST00000344823
    Conserved Domains (1) summary
    cl02605
    Location:42 – 152
    Blast Score: 454
    SCAN; SCAN domain

  2. NM_003450.2 → NP_003441.1  zinc finger protein 174 isoform a

    Description
    Transcript Variant: This variant (1) encodes the longer isoform (a).
    Source sequence(s)
    BI918471,BM969505,CR590935,DA962432,U31248
    Consensus CDS
    CCDS10504.1
    UniProtKB/Swiss-Prot
    Q15697
    Related Ensembl
    ENSP00000268655, ENST00000268655
    Conserved Domains (2) summary
    pfam00096
    Location:326 – 348
    Blast Score: 90
    zf-C2H2; Zinc finger, C2H2 type
    cl02605
    Location:42 – 152
    Blast Score: 475
    SCAN; SCAN domain

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Genome Reference Consortium Human Build 37 (GRCh37), Primary_Assembly

Genomic

  1. NC_000016.9

    Range
    3451189..3459363
    Download
    GenBank FASTA Sequence Viewer (Graphics)

  2. NT_010393.16 

    Range
    3391189..3399363
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (Celera)

Genomic

  1. AC_000059.1

    Range
    3657973..3666143
    Download
    GenBank FASTA Sequence Viewer (Graphics)

  2. NW_926018.1 

    Range
    3373623..3381793
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (HuRef)

Genomic

  1. AC_000148.1

    Range
    3420857..3429024
    Download
    GenBank FASTA Sequence Viewer (Graphics)

  2. NW_001838341.1 

    Range
    752687..760854
    Download
    GenBank FASTA Sequence Viewer (Graphics)

[Top][Help]Related Sequences

  Nucleotide   Protein
  genomic   AC025283.6  (98811..106931)   None
  genomic   CH471112.2   EAW85368.1
  mRNA   AF542096.1   AAN40766.1
  mRNA   BC000876.1   AAH00876.1
  mRNA   BC001161.1   AAH01161.1
  mRNA   BI918471.1   None
  mRNA   BM969505.1   None
  mRNA   BT006923.1   AAP35569.1
  mRNA   CR590935.1   None
  mRNA   DA962432.1   None
  mRNA   U31248.1   AAB04897.1
Protein Accession   Links
Q15697.1   GenPept   UniProtKB/Swiss-Prot:Q15697
Q8IZN5   GenPept   UniProtKB/TrEMBL:Q8IZN5

[Top][Help]Additional Links

Gene LinkOut

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