Official Symbol

1110007L15Rikprovided by MGI

Official Full Name

RIKEN cDNA 1110007L15 geneprovided by MGI

Primary Source

MGI:1914854

See related

Ensembl:ENSMUSG00000025858

Gene type

protein coding

RefSeq status

VALIDATED

Organism

Mus musculus

Lineage

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus

Also known as

Cee; AW412535; 1110007L15Rik

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chromosome: 5; Location: 5 G2See 1110007L15Rik in MapViewer

Preferred Names

conserved edge expressed protein

Names

conserved edge expressed protein

OTTMUSP00000030513

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001163316.1 → NP_001156788.1  conserved edge expressed protein isoform 2

   Description

   Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.

   Source sequence(s)

   AK003551,CJ048159

   UniProtKB/Swiss-Prot

   Q9D1H7

   Conserved Domains (1) summary

   pfam04190
   Location:1 – 238
   Blast Score: 855

   DUF410; Protein of unknown function (DUF410)

2. NM_026269.2 → NP_080545.2  conserved edge expressed protein isoform 1

   Description

   Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).

   Source sequence(s)

   AK003551,CJ053487

   Consensus CDS

   CCDS19805.1

   UniProtKB/Swiss-Prot

   Q9D1H7

   Related Ensembl

   ENSMUSP00000026976, ENSMUST00000026976

   Conserved Domains (1) summary

   pfam04190
   Location:54 – 291
   Blast Score: 850

   DUF410; Protein of unknown function (DUF410)

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference assembly (C57BL/6J)

Genomic

1. NC_000071.5

   Range

   139728328..139746003

   Download

   GenBank FASTA Sequence Viewer (Graphics)

2. NT_039316.7 

   Range

   569448..587123

   Download

   GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (based on Celera)

Genomic

1. AC_000027.1

   Range

   136306466..136324118

   Download

   GenBank FASTA Sequence Viewer (Graphics)

2. NW_001030796.1 

   Range

   43147847..43165499

   Download

   GenBank FASTA Sequence Viewer (Graphics)