1: Tbc1d20 TBC1 domain family, member 20 [ Mus musculus ]

GeneID: 67231 updated 3-Dec-2009

[Top][Help]Summary

Official Symbol
Tbc1d20provided by MGI
Official Full Name
TBC1 domain family, member 20provided by MGI
Primary Source
MGI:1914481
Locus Tag
RP23-452D3.4
See related
Ensembl:ENSMUSG00000027465
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus
Also known as
AI414693; 1110028I04Rik; 2810442O16Rik; Tbc1d20

[Top][Help]Genomic regions, transcripts, and products

(plus) Go to reference sequence detailsTry our new Sequence Viewer


[Top][Help]Genomic context

chromosome: 2; Location: 2 H1See Tbc1d20 in MapViewer

[Top][Help]Bibliography

Related Articles in PubMed

[Top][Help]General gene information

Markers

AU048389(e-PCR)
Links: UniSTS:109583
AI414693(e-PCR)
Links: UniSTS:159052

Homology

Homologs of the Tbc1d20 gene The Tbc1d20 gene is conserved in human, dog, cow, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.pombe, M.grisea, and N.crassa.


Map Viewer (Human, Rat)

Gene Ontology Provided by GOA

Function Evidence
GTPase activator activity IEA   
Rab GTPase activator activity IEA   
Process Evidence
regulation of Rab GTPase activity IEA   
Component Evidence
integral to membrane IEA   
intracellular IEA   
membrane IEA   

[Top][Help]General protein information

Preferred Names
TBC1 domain family, member 20
Names
TBC1 domain family, member 20
OTTMUSP00000016876

[Top][Help]NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

mRNA and Protein(s)

  1. NM_024196.3NP_077158.1  TBC1 domain family, member 20

    Source sequence(s)
    AL831735
    Consensus CDS
    CCDS16880.1
    UniProtKB/TrEMBL
    Q0P648
    UniProtKB/Swiss-Prot
    Q9D9I4
    Related Ensembl
    ENSMUSP00000028963, ENSMUST00000028963
    Conserved Domains (1) summary
    cl02495
    Location:62243
    Blast Score: 125
    TBC; TBC domain

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly (C57BL/6J)

Genomic

  1. NC_000068.6

    Range
    152119607..152138325
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NT_039207.7 

    Range
    93160909..93179627
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (based on Celera)

Genomic

  1. AC_000024.1

    Range
    158107983..158126732
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_001030712.1 

    Range
    862653..881402
    Download
    GenBank FASTA Sequence Viewer (Graphics)

[Top][Help]Related Sequences

  Nucleotide   Protein Strain
  genomic   AL831735.10   CAM24732.1
       CAQ12369.1
       CAQ12370.1
  genomic   CH466551.1   EDL05955.1   mixed
       EDL05956.1   mixed
       EDL05957.1   mixed
  mRNA   AK006877.1   BAB24777.1   C57BL/6J
  mRNA   AK036751.1   None   C57BL/6J
  mRNA   AK076124.1   BAC36202.1   C57BL/6J
  mRNA   AK082369.1   None   C57BL/6J
  mRNA   AK085702.1   None   C57BL/6J
  mRNA   AK151174.1   None   C57BL/6J
  mRNA   AK158274.1   BAE34442.1   C57BL/6J
  mRNA   AK168985.1   BAE40785.1   C57BL/6J
  mRNA   AK172349.1   BAE42961.1   NOD
  mRNA   AK172372.1   BAE42970.1   NOD
  mRNA   AK177685.1   None
  mRNA   AK181212.1   None
  mRNA   AK183263.1   None
  mRNA   AK187119.1   None
  mRNA   AK188394.1   None
  mRNA   AK192023.1   None
  mRNA   AK194089.1   None
  mRNA   AK198420.1   None
  mRNA   AK199107.1   None
  mRNA   AK202139.1   None
  mRNA   AK208244.1   None
  mRNA   AK212404.1   None
  mRNA   AK213499.1   None
  mRNA   AK213557.1   None
  mRNA   AK216122.1   None
  mRNA   AK219611.1   None
  mRNA   BC002196.1   AAH02196.1
  mRNA   BC034504.1   None   FVB/N
  mRNA   BC040089.1   AAH40089.1   CZECHII
  mRNA   BC086617.1   None   C57BL/6
Protein Accession   Links
Q0P648   GenPept   UniProtKB/TrEMBL:Q0P648
Q3T9Q0   GenPept   UniProtKB/TrEMBL:Q3T9Q0
Q3T9Q9   GenPept   UniProtKB/TrEMBL:Q3T9Q9
Q3TFW3   GenPept   UniProtKB/TrEMBL:Q3TFW3
Q9D9I4.1   GenPept   UniProtKB/Swiss-Prot:Q9D9I4

[Top][Help]Additional Links

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