Official Symbol

Prpf18provided by MGI

Official Full Name

PRP18 pre-mRNA processing factor 18 homolog (yeast)provided by MGI

Primary Source

MGI:1914479

Locus Tag

RP23-198D21.4

See related

Ensembl:ENSMUSG00000039449

Gene type

protein coding

RefSeq status

PROVISIONAL

Organism

Mus musculus

Lineage

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus

Also known as

2810441A10Rik; Prpf18

(minus strand) Go to reference sequence detailsTry our new Sequence Viewer

chromosome: 2; Location: 2 A1See Prpf18 in MapViewer

Preferred Names

PRP18 pre-mRNA processing factor 18 homolog

Names

PRP18 pre-mRNA processing factor 18 homolog

HPRP18 homolog

OTTMUSP00000011586

OTTMUSP00000011587

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_026045.3 → NP_080321.2  PRP18 pre-mRNA processing factor 18 homolog

   Source sequence(s)

   BC004573

   Consensus CDS

   CCDS15657.1

   UniProtKB/TrEMBL

   B1AXJ8

   UniProtKB/Swiss-Prot

   Q8BM39

   Related Ensembl

   ENSMUSP00000041428, ENSMUST00000035721

   Conserved Domains (2) summary

   pfam02840
   Location:188 – 332
   Blast Score: 657

   Prp18; Prp18 domain

   cl02632
   Location:79 – 122
   Blast Score: 153

   PRP4; pre-mRNA processing factor 4 (PRP4) like

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference assembly (C57BL/6J)

Genomic

1. NC_000068.6

   Range

   4543212..4573131, complement

   Download

   GenBank FASTA Sequence Viewer (Graphics)

2. NT_039202.7 

   Range

   1543212..1573131, complement

   Download

   GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (based on Celera)

Genomic

1. AC_000024.1

   Range

   4574752..4604660, complement

   Download

   GenBank FASTA Sequence Viewer (Graphics)

2. NW_001030686.1 

   Range

   1574752..1604660, complement

   Download

   GenBank FASTA Sequence Viewer (Graphics)